- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- hetero-oligomer
- Ligands
- 8 x CA: CALCIUM ION(Non-covalent)
- 8 x CAP: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE(Non-covalent)
CAP.2: 22 residues within 4Å:- Chain A: T.173, K.175, K.177, K.201, E.204, H.294, R.295, H.298, H.327, K.334, L.335, S.379, G.380, G.381, F.402, G.403, G.404
- Chain K: E.60, T.65, W.66, N.123
- Ligands: CA.1
25 PLIP interactions:21 interactions with chain A, 4 interactions with chain K- Hydrogen bonds: A:T.173, A:K.175, A:H.298, A:S.379, A:G.381, A:G.403, A:G.404, K:T.65, K:T.65, K:N.123
- Water bridges: A:K.177, A:K.177, A:R.295, A:R.295, A:S.328, A:G.329, A:I.382, K:E.60
- Salt bridges: A:K.175, A:K.175, A:K.177, A:R.295, A:H.327, A:K.334, A:K.334
CAP.4: 23 residues within 4Å:- Chain B: T.173, K.175, K.177, K.201, D.203, E.204, H.294, R.295, H.298, H.327, K.334, L.335, S.379, G.380, G.381, F.402, G.403, G.404
- Chain J: E.60, T.65, W.66, N.123
- Ligands: CA.3
23 PLIP interactions:20 interactions with chain B, 3 interactions with chain J- Hydrogen bonds: B:T.173, B:K.175, B:H.298, B:S.379, B:G.381, B:G.403, B:G.404, J:T.65, J:T.65, J:N.123
- Water bridges: B:R.295, B:R.295, B:G.329, B:G.329, B:G.380, B:I.382
- Salt bridges: B:K.175, B:K.175, B:K.177, B:R.295, B:H.327, B:K.334, B:K.334
CAP.6: 23 residues within 4Å:- Chain C: T.173, K.175, K.177, K.201, D.203, E.204, H.294, R.295, H.298, H.327, K.334, L.335, S.379, G.380, G.381, F.402, G.403, G.404
- Chain I: E.60, T.65, W.66, N.123
- Ligands: CA.5
24 PLIP interactions:20 interactions with chain C, 4 interactions with chain I- Hydrogen bonds: C:T.173, C:K.175, C:H.298, C:S.379, C:S.379, C:G.380, C:G.381, C:G.403, C:G.404, I:T.65, I:T.65, I:N.123
- Water bridges: C:K.177, C:R.295, C:R.295, C:I.382, I:E.60
- Salt bridges: C:K.175, C:K.175, C:K.177, C:R.295, C:H.327, C:K.334, C:K.334
CAP.8: 23 residues within 4Å:- Chain D: T.173, K.175, K.177, K.201, D.203, E.204, H.294, R.295, H.298, H.327, K.334, L.335, S.379, G.380, G.381, F.402, G.403, G.404
- Chain L: E.60, T.65, W.66, N.123
- Ligands: CA.7
24 PLIP interactions:20 interactions with chain D, 4 interactions with chain L- Hydrogen bonds: D:T.173, D:K.175, D:H.298, D:S.379, D:G.381, D:G.403, D:G.404, L:T.65, L:T.65, L:N.123
- Water bridges: D:K.177, D:R.295, D:G.329, D:S.379, D:I.382, D:G.405, L:E.60
- Salt bridges: D:K.175, D:K.175, D:K.177, D:R.295, D:H.327, D:K.334, D:K.334
CAP.10: 22 residues within 4Å:- Chain C: E.60, T.65, W.66, N.123
- Chain I: T.173, K.175, K.177, K.201, E.204, H.294, R.295, H.298, H.327, K.334, L.335, S.379, G.380, G.381, F.402, G.403, G.404
- Ligands: CA.9
24 PLIP interactions:22 interactions with chain I, 2 interactions with chain C- Hydrogen bonds: I:T.173, I:T.173, I:K.175, I:H.298, I:S.379, I:G.381, I:G.403, I:G.404, C:T.65, C:N.123
- Water bridges: I:K.177, I:K.177, I:R.295, I:R.295, I:S.328, I:G.329, I:I.382
- Salt bridges: I:K.175, I:K.175, I:K.177, I:R.295, I:H.327, I:K.334, I:K.334
CAP.12: 23 residues within 4Å:- Chain B: E.60, T.65, W.66, N.123
- Chain J: T.173, K.175, K.177, K.201, D.203, E.204, H.294, R.295, H.298, H.327, K.334, L.335, S.379, G.380, G.381, F.402, G.403, G.404
- Ligands: CA.11
23 PLIP interactions:21 interactions with chain J, 2 interactions with chain B- Hydrogen bonds: J:T.173, J:T.173, J:K.175, J:H.298, J:S.379, J:G.381, J:G.403, J:G.404, B:T.65, B:N.123
- Water bridges: J:R.295, J:R.295, J:G.329, J:G.329, J:G.380, J:I.382
- Salt bridges: J:K.175, J:K.175, J:K.177, J:R.295, J:H.327, J:K.334, J:K.334
CAP.14: 23 residues within 4Å:- Chain A: E.60, T.65, W.66, N.123
- Chain K: T.173, K.175, K.177, K.201, D.203, E.204, H.294, R.295, H.298, H.327, K.334, L.335, S.379, G.380, G.381, F.402, G.403, G.404
- Ligands: CA.13
26 PLIP interactions:23 interactions with chain K, 3 interactions with chain A- Hydrogen bonds: K:T.173, K:T.173, K:K.175, K:E.204, K:H.298, K:S.379, K:S.379, K:G.380, K:G.381, K:G.403, K:G.404, A:T.65, A:T.65, A:N.123
- Water bridges: K:K.177, K:K.177, K:R.295, K:R.295, K:I.382
- Salt bridges: K:K.175, K:K.175, K:K.177, K:R.295, K:H.327, K:K.334, K:K.334
CAP.16: 23 residues within 4Å:- Chain D: E.60, T.65, W.66, N.123
- Chain L: T.173, K.175, K.177, K.201, D.203, E.204, H.294, R.295, H.298, H.327, K.334, L.335, S.379, G.380, G.381, F.402, G.403, G.404
- Ligands: CA.15
25 PLIP interactions:23 interactions with chain L, 2 interactions with chain D- Hydrogen bonds: L:T.173, L:T.173, L:K.175, L:E.204, L:H.298, L:S.379, L:G.381, L:G.403, L:G.404, D:T.65, D:N.123
- Water bridges: L:K.177, L:K.177, L:R.295, L:G.329, L:S.379, L:I.382, L:G.405
- Salt bridges: L:K.175, L:K.175, L:K.177, L:R.295, L:H.327, L:K.334, L:K.334
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Karehabadi, S. et al., Calcium Supports Loop Closure But not Catalysis in Rubisco. J.Mol.Biol. (2003)
- Release Date
- 2003-10-14
- Peptides
- RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN: ABCDIJKL
RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN: EFGHMNOP - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
CC
ED
GI
AJ
CK
EL
GE
IF
JG
KH
LM
IN
JO
KP
L
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- hetero-oligomer
- Ligands
- 8 x CA: CALCIUM ION(Non-covalent)
- 8 x CAP: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Karehabadi, S. et al., Calcium Supports Loop Closure But not Catalysis in Rubisco. J.Mol.Biol. (2003)
- Release Date
- 2003-10-14
- Peptides
- RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN: ABCDIJKL
RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN: EFGHMNOP - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
CC
ED
GI
AJ
CK
EL
GE
IF
JG
KH
LM
IN
JO
KP
L