SMTL ID : 1b7h.1

OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-NORLEUCYL-LYSINE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x LYS- NLE- LYS: LYS-NLE-LYS PEPTIDE(Non-covalent)

LYS-NLE-LYS.1: 21 residues within 4Å: Chain A: E.32, G.33, V.34, S.37, Y.109, Y.245, N.246, N.247, Y.269, W.397, L.401, R.404, R.413, G.415, W.416, C.417, A.418, D.419, T.438, Y.485, N.506 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:E.32, A:V.34, A:L.401, A:W.416, A:Y.485 Hydrogen bonds: A:E.32, A:V.34, A:Y.109, A:Y.269, A:G.415, A:G.415, A:G.415, A:C.417, A:C.417, A:N.506 Water bridges: A:N.247, A:Y.485, A:N.506 Salt bridges: A:R.413

2 x U1: URANIUM ATOM(Non-covalent)

U1.2: 2 residues within 4Å: Chain A: D.362, D.410 No protein-ligand interaction detected (PLIP) U1.3: 1 residues within 4Å: Chain A: E.329 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Davies, T.G. et al., Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes. Protein Sci. (1999)

Release Date

1998-11-25

Peptides

Periplasmic oligopeptide-binding protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Periplasmic oligopeptide-binding protein

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