SMTL ID : 1ckl.5 (5 other biounits)

N-TERMINAL TWO DOMAINS OF HUMAN CD46 (MEMBRANE COFACTOR PROTEIN, MCP)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 3 residues within 4Å: Chain A: N.49, L.53, P.54 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.53

1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-MAN-MAN-MAN.2: 7 residues within 4Å: Chain A: A.79, N.80, Y.87, Q.88, H.90, I.104, Y.106 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.104 Hydrogen bonds: A:Q.88, A:Y.106

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 2 residues within 4Å: Chain A: D.57, D.58 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.58

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 3 residues within 4Å: Chain A: A.41, T.42, H.43 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Casasnovas, J.M. et al., Crystal structure of two CD46 domains reveals an extended measles virus-binding surface. EMBO J. (1999)

Release Date

1999-06-11

Peptides

PROTEIN (CD46): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

PROTEIN (CD46)

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