SMTL ID : 1czy.1

CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN THE TRAF DOMAIN OF HUMAN TRAF2 AND AN LMP1 BINDING PEPTIDE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-trimer

Ligands

2 x ACE- PRO- GLN- GLN- ALA- THR- ASP- ASP: LATENT MEMBRANE PROTEIN 1(Non-covalent)

ACE-PRO-GLN-GLN-ALA-THR-ASP-ASP.1: 15 residues within 4Å: Chain A: R.60, Y.62, D.66, G.67, F.77, F.114, R.115, S.120, S.121, S.122, I.132, A.133, S.134, G.135, P.137 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:F.114, A:I.132 Hydrogen bonds: A:R.60, A:Y.62, A:D.66, A:G.67, A:S.122, A:S.122, A:A.133, A:A.133, A:G.135 Water bridges: A:A.42, A:R.60, A:R.60, A:R.60, A:R.60, A:D.66, A:S.121, A:N.131, A:S.134 Salt bridges: A:R.60, A:R.60 ACE-PRO-GLN-GLN-ALA-THR-ASP-ASP.2: 15 residues within 4Å: Chain C: R.60, Y.62, D.66, G.67, F.77, F.114, R.115, S.120, S.121, S.122, I.132, A.133, S.134, G.135, P.137 19 PLIP interactions: 19 interactions with chain C Hydrophobic interactions: C:F.77, C:F.114, C:I.132, C:P.137 Hydrogen bonds: C:R.60, C:R.60, C:Y.62, C:D.66, C:S.122, C:S.122, C:A.133, C:A.133, C:G.135 Water bridges: C:D.66, C:G.67, C:T.68, C:N.131 Salt bridges: C:R.60, C:R.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ye, H. et al., The structural basis for the recognition of diverse receptor sequences by TRAF2. Mol.Cell (1999)

Release Date

2000-03-08

Peptides

TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED PROTEIN 2: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED PROTEIN 2

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