SMTL ID : 1dai.1

DETHIOBIOTIN SYNTHETASE COMPLEXED WITH 7-(CARBOXYAMINO)-8-AMINO-NONANOIC ACID

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

homo-dimer

Ligands

2 x DSD: 7-(CARBOXYAMINO)-8-AMINO-NONANOIC ACID(Non-covalent)

DSD.1: 14 residues within 4Å: Chain A: K.37, A.40, S.41, P.79, T.80, S.81, A.117, G.118 Chain B: L.149, G.150, C.151, I.152, N.153, Y.187 12 PLIP interactions: 4 interactions with chain B, 8 interactions with chain A Hydrogen bonds: B:G.150, B:I.152, B:N.153, B:Y.187, A:K.37, A:S.41, A:S.41, A:S.41, A:G.118 Hydrophobic interactions: A:P.79 Water bridges: A:N.52, A:T.122 DSD.2: 14 residues within 4Å: Chain A: L.149, G.150, C.151, I.152, N.153, Y.187 Chain B: K.37, A.40, S.41, P.79, T.80, S.81, A.117, G.118 12 PLIP interactions: 9 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:P.79 Hydrogen bonds: B:K.37, B:S.41, B:S.41, B:S.41, B:G.118, A:G.150, A:I.152, A:N.153 Water bridges: B:D.54, B:D.54, B:T.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, W. et al., Mechanism of an ATP-dependent carboxylase, dethiobiotin synthetase, based on crystallographic studies of complexes with substrates and a reaction intermediate. Biochemistry (1995)

Release Date

1996-06-20

Peptides

DETHIOBIOTIN SYNTHETASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

DETHIOBIOTIN SYNTHETASE

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