SMTL ID : 1dao.1 (5 other biounits)

COVALENT ADDUCT OF D-AMINO ACID OXIDASE FROM PIG KIDNEY WITH 3-METHYL-2-OXO-VALERIC ACID

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-dimer

Ligands

2 x FAB: FLAVIN-ADENINE DINUCLEOTIDE-N5-ISOBUTYL KETONE(Non-covalent)

FAB.1: 36 residues within 4Å: Chain A: I.6, G.7, A.8, G.9, V.10, I.11, A.36, D.37, R.38, T.43, T.44, T.45, V.47, A.48, A.49, G.50, L.51, R.162, K.163, V.164, C.181, T.182, G.183, W.185, Y.224, Y.228, G.281, R.283, P.284, H.311, G.312, G.313, Y.314, G.315, L.316, T.317 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:T.44, A:A.48, A:A.49, A:Y.228, A:R.283 Hydrogen bonds: A:A.8, A:G.9, A:I.11, A:G.12, A:D.37, A:D.37, A:R.38, A:T.44, A:T.45, A:T.45, A:G.50, A:L.51, A:L.51, A:V.164, A:V.164, A:R.283, A:G.312, A:Y.314, A:G.315, A:L.316, A:T.317 pi-Cation interactions: A:R.283 FAB.2: 36 residues within 4Å: Chain B: I.6, G.7, A.8, G.9, V.10, I.11, A.36, D.37, R.38, T.43, T.44, T.45, V.47, A.48, A.49, G.50, L.51, R.162, K.163, V.164, C.181, T.182, G.183, W.185, Y.224, Y.228, G.281, R.283, P.284, H.311, G.312, G.313, Y.314, G.315, L.316, T.317 28 PLIP interactions: 28 interactions with chain B Hydrophobic interactions: B:T.44, B:A.48, B:A.49, B:Y.228, B:R.283 Hydrogen bonds: B:A.8, B:G.9, B:I.11, B:G.12, B:D.37, B:R.38, B:T.44, B:T.44, B:T.45, B:T.45, B:G.50, B:L.51, B:L.51, B:V.164, B:V.164, B:R.283, B:G.312, B:Y.314, B:G.315, B:L.316, B:T.317, B:T.317 pi-Cation interactions: B:R.283

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Todone, F. et al., Active site plasticity in D-amino acid oxidase: a crystallographic analysis. Biochemistry (1997)

Release Date

1997-07-23

Peptides

D-AMINO ACID OXIDASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
E

D-AMINO ACID OXIDASE

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