SMTL ID : 1e04.1 (1 other biounit)

PLASMA BETA ANTITHROMBIN-III

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: M.20, N.96, K.350 Ligands: MAN.4 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 3 residues within 4Å: Chain A: P.19, N.155, E.156 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG-BMA.3: 1 residues within 4Å: Chain A: N.192 No protein-ligand interaction detected (PLIP)

1 x MAN: alpha-D-mannopyranose(Non-functional Binders)

MAN.4: 1 residues within 4Å: Ligands: NAG-NAG.1 No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 7 residues within 4Å: Chain A: S.56, L.304, Q.305, L.308, F.411, R.413, I.420 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.56, A:R.413 Water bridges: A:R.413

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mccoy, A.J. et al., Structure of Beta-Antithrombin and the Effect of Glycosylation on Antithrombin'S Heparin Affinity and Activity. J.Mol.Biol. (2003)

Release Date

2000-06-02

Peptides

ANTITHROMBIN-III: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
I

ANTITHROMBIN-III

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