SMTL ID : 1e5j.1

ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHAERENS IN THE TETRAGONAL CRYSTAL FORM IN COMPLEX WITH METHYL-4II-S-ALPHA-CELLOBIOSYL-4II-THIO-BETA-CELLOBIOSIDE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x MGL- SGC- SGC- GLC: alpha-D-glucopyranose-(1-4)-4-thio-beta-D-glucopyranose-(1-4)-4-thio-beta-D-glucopyranose-(1-4)-methyl beta-D-glucopyranoside

MGL-SGC-SGC-GLC.1: 15 residues within 4Å: Chain A: H.35, W.39, Y.40, Y.66, L.103, E.139, W.178, Q.180, Y.202, H.206, E.228, A.234, W.262, K.267, E.269 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.40, A:Y.40, A:H.206, A:Y.66, A:W.262, A:K.267, A:E.269 Water bridges: A:K.267, A:K.267, A:E.269, A:S.271

4 x CA: CALCIUM ION(Non-covalent)

CA.2: 1 residues within 4Å: Chain A: E.157 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.157, H2O.8, H2O.8 CA.3: 4 residues within 4Å: Chain A: G.127, D.166, N.168, N.169 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:G.127, A:D.166, H2O.1, H2O.8 CA.4: 2 residues within 4Å: Chain A: D.120, E.124 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.120, A:D.120, A:E.124, H2O.6 CA.5: 1 residues within 4Å: Chain A: D.75 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.75, H2O.4, H2O.4, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fort, S. et al., Mixed-Linkage Cellooligosaccharides: A New Class of Glycoside Hydrolase Inhibitors. Chembiochem (2001)

Release Date

2001-07-26

Peptides

ENDOGLUCANASE 5A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ENDOGLUCANASE 5A

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