SMTL ID : 1ezq.1

CRYSTAL STRUCTURE OF HUMAN COAGULATION FACTOR XA COMPLEXED WITH RPR128515

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.56, N.58, Q.61, E.62, E.66 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.56, A:N.58, A:E.66, H2O.1, H2O.2

1 x RPR: 3-[(3'-AMINOMETHYL-BIPHENYL-4-CARBONYL)-AMINO]-2-(3-CARBAMIMIDOYL-BENZYL)-BUTYRIC ACID METHYL ESTER(Non-covalent)

RPR.2: 18 residues within 4Å: Chain A: E.83, T.84, Y.85, R.132, E.135, F.162, D.179, A.180, C.181, Q.182, S.185, V.203, W.205, G.206, E.207, G.208, C.209, G.216 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:Y.85, A:F.162, A:F.162, A:A.180, A:V.203, A:W.205 Hydrogen bonds: A:E.83, A:D.179, A:A.180, A:Q.182, A:G.208, A:G.208 Water bridges: A:D.179, A:W.205 Salt bridges: A:R.132 pi-Stacking: A:F.162, A:W.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maignan, S. et al., Crystal structures of human factor Xa complexed with potent inhibitors. J.Med.Chem. (2000)

Release Date

2000-09-20

Peptides

COAGULATION FACTOR XA: A
COAGULATION FACTOR XA: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

COAGULATION FACTOR XA

COAGULATION FACTOR XA

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