SMTL ID : 1lpz.2 (1 other biounit)

CRYSTAL STRUCTURE OF FXA IN COMPLEX WITH 41.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.56, N.58, Q.61, E.63, E.66 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.56, A:N.58, A:Q.61, A:E.66, H2O.172

1 x CMB: 1-(3-CARBAMIMIDOYLBENZYL)-N-(3,5-DICHLOROBENZYL)-4-METHYL-1H-INDOLE-2-CARBOXAMIDE(Non-covalent)

CMB.2: 17 residues within 4Å: Chain A: T.84, Y.85, R.132, E.135, F.162, D.179, A.180, C.181, Q.182, S.185, V.203, W.205, G.206, E.207, G.208, C.209, G.216 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:Q.182, A:Q.182, A:V.203, A:W.205, A:W.205 Hydrogen bonds: A:A.180, A:G.206, A:G.208 Water bridges: A:D.179, A:Q.182, A:Q.182, A:W.205, A:I.217 pi-Stacking: A:Y.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matter, H. et al., Design and Quantitative Structure-Activity relationship of 3-amidinobenzyl-1H-indole-2-carboxamides as potent, nonchiral, and selective inhibitors of blood coagulation factor Xa. J.Biol.Chem. (2002)

Release Date

2003-05-08

Peptides

Blood coagulation factor Xa: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Blood coagulation factor Xa

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