SMTL ID : 1fsi.2 (5 other biounits)

CRYSTAL STRUCTURE OF CYCLIC NUCLEOTIDE PHOSPHODIESTERASE OF APPR>P FROM ARABIDOPSIS THALIANA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: W.12, H.42, T.44, H.119, S.121, Y.124 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.44, A:T.44, A:S.121, A:Y.124 Salt bridges: A:H.42, A:H.119 SO4.2: 6 residues within 4Å: Chain A: R.76, V.77, S.78, T.79, K.133, Q.136 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.79, A:Q.136 Salt bridges: A:R.76, A:K.133 SO4.3: 3 residues within 4Å: Chain A: K.5, K.160, E.172 4 PLIP interactions: 4 interactions with chain A Water bridges: A:K.160, A:K.160 Salt bridges: A:K.5, A:K.160

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hofmann, A. et al., Structure and mechanism of activity of the cyclic phosphodiesterase of Appr>p, a product of the tRNA splicing reaction. EMBO J. (2000)

Release Date

2000-11-22

Peptides

CYCLIC PHOSPHODIESTERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

CYCLIC PHOSPHODIESTERASE

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