- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 2 x ACT: ACETATE ION(Non-functional Binders)
ACT.3: 4 residues within 4Å:- Chain A: N.58, P.59, K.60, S.61
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:K.60
- Hydrogen bonds: A:K.60, A:S.61
- Salt bridges: A:K.60
ACT.8: 4 residues within 4Å:- Chain B: N.58, P.59, K.60, S.61
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:K.60
- Hydrogen bonds: B:K.60, B:S.61
- Salt bridges: B:K.60
- 2 x 9AR: 9-HYDROXY ARISTOLOCHIC ACID(Non-covalent)
9AR.4: 15 residues within 4Å:- Chain A: L.2, F.5, I.9, A.17, I.18, Y.21, S.22, Y.27, G.29, W.30, C.44, H.47, D.48, Y.51, K.60
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:L.2, A:F.5, A:I.18
- Hydrogen bonds: A:C.44
- Water bridges: A:G.29, A:G.29
9AR.9: 15 residues within 4Å:- Chain B: L.2, F.5, I.9, A.17, I.18, Y.21, S.22, Y.27, G.29, W.30, C.44, H.47, D.48, Y.51, K.60
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:L.2, B:F.5, B:I.18
- Hydrogen bonds: B:C.44, B:H.47
- Water bridges: B:G.29, B:G.29
- 4 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 3 residues within 4Å:- Chain A: Y.110, P.111, L.114
1 PLIP interactions:1 interactions with chain A- Water bridges: A:L.109
GOL.10: 3 residues within 4Å:- Chain B: Y.110, P.111, L.114
1 PLIP interactions:1 interactions with chain B- Water bridges: B:L.109
GOL.15: 1 residues within 4Å:- Chain C: E.11
1 PLIP interactions:1 interactions with chain C- Water bridges: C:K.7
GOL.20: 1 residues within 4Å:- Chain D: E.11
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:E.11
- Water bridges: D:K.7
- 4 x DIO: 1,4-DIETHYLENE DIOXIDE(Non-covalent)
DIO.13: 4 residues within 4Å:- Chain C: R.97, L.100, N.101
- Ligands: DIO.14
No protein-ligand interaction detected (PLIP)DIO.14: 3 residues within 4Å:- Chain C: Q.98, N.101
- Ligands: DIO.13
1 PLIP interactions:1 interactions with chain C- Water bridges: C:N.101
DIO.18: 4 residues within 4Å:- Chain D: R.97, L.100, N.101
- Ligands: DIO.19
No protein-ligand interaction detected (PLIP)DIO.19: 3 residues within 4Å:- Chain D: Q.98, N.101
- Ligands: DIO.18
1 PLIP interactions:1 interactions with chain D- Water bridges: D:N.101
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
-
Chandra, V. et al., Structural Basis of Phospholipase A2 Inhibition for the Synthesis of Prostaglandins by the Plant Alkaloid Aristolochic Acid from a 1.7 A Crystal Structure. Biochemistry (2002)
- Release Date
- 2002-08-28
- Peptides
- PHOSPHOLIPASE A2: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
BD
B
SMTL ID : 1fv0.3 (2 other biounits)
FIRST STRUCTURAL EVIDENCE OF THE INHIBITION OF PHOSPHOLIPASE A2 BY ARISTOLOCHIC ACID: CRYSTAL STRUCTURE OF A COMPLEX FORMED BETWEEN PHOSPHOLIPASE A2 AND ARISTOLOCHIC ACID
PHOSPHOLIPASE A2
Toggle Identical (ABCD)Related Entries With Identical Sequence
1cl5.1 | 1cl5.2 | 1fb2.1 | 1fb2.2 | 1fv0.1 | 1fv0.2 | 1jq8.1 | 1jq8.2 | 1jq9.1 | 1jq9.2 | 1jq9.3 | 1jq9.4 | 1kpm.1 | 1kpm.2 | 1oxl.1 | 1oxl.2 | 1oxl.3 | 1oxl.4 | 1q7a.1 | 1skg.1 | 1sqz.1 | 1sv3.1 | 1sv9.1 | 1sxk.1 | 1tdv.1 | 1tg1.1 | 1tg4.1 | 1th6.1 | 1tj9.1 | 1tk4.1 more...less...1tp2.1 |
1y38.1 |
1zr8.1 |
1zwp.1 |
1zyx.1 |
2arm.1 |
2b17.1 |
2dpz.1 |
2fnx.1 |
2g58.1 |
2gns.1 |
2o1n.1 |
2oli.1 |
2otf.1 |
2oth.1 |
2oub.1 |
2oyf.1 |
2pb8.1 |
2pmj.1 |
2pws.1 |
2pyc.1 |
2q1p.1 |
2qhw.1 |
2qu9.1 |
2que.1 |
2qvd.1 |
2zbh.1 |
3cbi.1 |
3cbi.2 |
3cbi.3 |
3cbi.4 |
3fg5.1 |
3fo7.1 |
3g8f.1 |
3h1x.1 |
4eix.1 |
4fga.1 |
4gfy.1 |
4gld.1 |
4hmb.1 |
4qem.1 |
4qer.1 |
4qf7.1 |
4qf8.1 |
4qgd.1 |
4qmc.1 |
5vet.1