SMTL ID : 4qmc.1

Crystal structure of complex formed between phospholipase A2 and Biotin-sulfoxide at 1.09 A Resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.09 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: C.75, E.76, K.77, N.83, E.87 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.83, A:E.87, A:E.87 Water bridges: A:E.76, A:N.83

1 x BSO: BIOTIN-D-SULFOXIDE(Non-covalent)

BSO.2: 13 residues within 4Å: Chain A: L.2, F.5, I.9, A.17, Y.21, S.22, Y.27, C.28, G.29, C.44, H.47, D.48, Y.51 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.5, A:I.9, A:A.17 Hydrogen bonds: A:Y.51, A:Y.51 Salt bridges: A:D.48

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: S.1, L.2, L.3, R.63 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.1, A:L.3 Water bridges: A:R.63 Salt bridges: A:R.63

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.4: 4 residues within 4Å: Chain A: C.57, S.80, C.81, R.84 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.80 Water bridges: A:S.80 Salt bridges: A:R.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shukla, P.K. et al., Crystal structure of complex formed between phospholipase A2 and Biotin-sulfoxide at 1.09 A Resolution. To be published

Release Date

2014-07-30

Peptides

Phospholipase A2 VRV-PL-VIIIa: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phospholipase A2 VRV-PL-VIIIa

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