SMTL ID : 2oth.1

Crystal structure of a ternary complex of phospholipase A2 with indomethacin and nimesulide at 2.9 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x NIM: 4-NITRO-2-PHENOXYMETHANESULFONANILIDE(Non-covalent)

NIM.1: 6 residues within 4Å: Chain A: L.2, A.17, I.18, S.22, G.29, K.60 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.2 Hydrogen bonds: A:K.60

1 x IMN: INDOMETHACIN(Non-covalent)

IMN.2: 4 residues within 4Å: Chain A: D.48, Y.51, P.55, K.60 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.51, A:K.60 Hydrogen bonds: A:D.48 Salt bridges: A:K.60

1 x CCN: ACETONITRILE(Non-functional Binders)

CCN.3: 6 residues within 4Å: Chain A: C.43, V.46, H.47, A.91, A.92, C.95 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.46 Water bridges: A:A.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumar, S. et al., Crystal structure of a ternary complex of phospholipase A2 with indomethacin and nimesulide at 2.9 A resolution. To be Published

Release Date

2007-02-27

Peptides

Phospholipase A2 VRV-PL-VIIIa: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phospholipase A2 VRV-PL-VIIIa

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