SMTL ID : 1fwe.1

KLEBSIELLA AEROGENES UREASE, C319A VARIANT WITH ACETOHYDROXAMIC ACID (AHA) BOUND

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-oligomer

Ligands

6 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 7 residues within 4Å: Chain C: K.217, H.219, H.246, H.272, G.277 Ligands: NI.2, HAE.3 3 PLIP interactions: 2 interactions with chain C, 1 Ligand-Ligand interactions Metal complexes: C:H.246, C:H.272, HAE.3 NI.2: 7 residues within 4Å: Chain C: H.134, H.136, T.169, K.217, D.360 Ligands: NI.1, HAE.3 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Ligand interactions Metal complexes: C:H.134, C:H.136, C:D.360, HAE.3 NI.4: 7 residues within 4Å: Chain F: K.217, H.219, H.246, H.272, G.277 Ligands: NI.5, HAE.6 3 PLIP interactions: 2 interactions with chain F, 1 Ligand-Ligand interactions Metal complexes: F:H.246, F:H.272, HAE.6 NI.5: 7 residues within 4Å: Chain F: H.134, H.136, T.169, K.217, D.360 Ligands: NI.4, HAE.6 4 PLIP interactions: 3 interactions with chain F, 1 Ligand-Ligand interactions Metal complexes: F:H.134, F:H.136, F:D.360, HAE.6 NI.7: 7 residues within 4Å: Chain I: K.217, H.219, H.246, H.272, G.277 Ligands: NI.8, HAE.9 3 PLIP interactions: 2 interactions with chain I, 1 Ligand-Ligand interactions Metal complexes: I:H.246, I:H.272, HAE.9 NI.8: 7 residues within 4Å: Chain I: H.134, H.136, T.169, K.217, D.360 Ligands: NI.7, HAE.9 4 PLIP interactions: 3 interactions with chain I, 1 Ligand-Ligand interactions Metal complexes: I:H.134, I:H.136, I:D.360, HAE.9

3 x HAE: ACETOHYDROXAMIC ACID(Non-covalent)

HAE.3: 12 residues within 4Å: Chain C: H.134, H.136, A.167, K.217, H.219, H.246, H.272, G.277, D.360, A.363 Ligands: NI.1, NI.2 No protein-ligand interaction detected (PLIP) HAE.6: 12 residues within 4Å: Chain F: H.134, H.136, A.167, K.217, H.219, H.246, H.272, G.277, D.360, A.363 Ligands: NI.4, NI.5 No protein-ligand interaction detected (PLIP) HAE.9: 12 residues within 4Å: Chain I: H.134, H.136, A.167, K.217, H.219, H.246, H.272, G.277, D.360, A.363 Ligands: NI.7, NI.8 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pearson, M.A. et al., Structures of Cys319 variants and acetohydroxamate-inhibited Klebsiella aerogenes urease. Biochemistry (1997)

Release Date

1997-10-15

Peptides

UREASE: ADG
UREASE: BEH
UREASE: CFI

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
A

G
A

B
B

E
B

H
B

C
C

F
C

I
C

UREASE

UREASE

UREASE

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