SMTL ID : 1gal.1

CRYSTAL STRUCTURE OF GLUCOSE OXIDASE FROM ASPERGILLUS NIGER: REFINED AT 2.3 ANGSTROMS RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN.1: 3 residues within 4Å: Chain A: T.87, N.89, Y.509 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 5 residues within 4Å: Chain A: N.355, S.362, E.363, H.366, N.407 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.363, A:H.366 Water bridges: A:N.355, A:N.407 NAG.3: 4 residues within 4Å: Chain A: N.388, A.391, E.527, M.528 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.388, A:A.391 NAG.4: 5 residues within 4Å: Chain A: Y.159, N.161, S.163, C.164, C.206 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.159, A:N.161 NAG.5: 1 residues within 4Å: Chain A: N.168 No protein-ligand interaction detected (PLIP)

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.6: 38 residues within 4Å: Chain A: G.26, G.27, G.28, L.29, T.30, I.49, E.50, S.51, Y.68, F.72, H.78, Y.80, R.95, G.97, N.98, G.99, G.102, S.103, V.106, N.107, G.108, G.109, T.110, Q.248, Y.249, V.250, A.288, A.289, G.290, V.293, Y.515, H.516, D.548, G.549, H.559, V.560, M.561, F.564 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:F.72, A:V.106, A:N.107, A:Y.515, A:Y.515 Hydrogen bonds: A:G.27, A:L.29, A:T.30, A:S.51, A:G.97, A:G.99, A:S.103, A:N.107, A:G.108, A:T.110, A:T.110, A:V.250, A:V.250, A:G.549, A:H.559, A:M.561 Water bridges: A:G.28, A:G.31, A:S.103, A:T.110, A:S.291, A:Y.515

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hecht, H.J. et al., Crystal structure of glucose oxidase from Aspergillus niger refined at 2.3 A resolution. J.Mol.Biol. (1993)

Release Date

1993-10-31

Peptides

GLUCOSE OXIDASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GLUCOSE OXIDASE

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