- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x NO3: NITRATE ION(Non-functional Binders)
NO3.2: 12 residues within 4Å:- Chain A: G.12, D.13, K.16, A.39, G.40, H.41, A.223, Q.224
- Ligands: MG.1, HDA.3, IMP.4, GDP.5
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:D.13, A:K.16, A:G.40, A:H.41, A:Q.224
NO3.7: 12 residues within 4Å:- Chain B: G.12, D.13, K.16, A.39, G.40, H.41, A.223, Q.224
- Ligands: MG.6, HDA.8, IMP.9, GDP.10
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:D.13, B:D.13, B:K.16, B:G.40, B:H.41, B:Q.224
- 2 x HDA: HADACIDIN(Non-covalent)
HDA.3: 16 residues within 4Å:- Chain A: D.13, N.38, G.40, T.129, V.273, G.298, A.299, T.300, T.301, G.302, R.303, R.305
- Ligands: MG.1, NO3.2, IMP.4, GDP.5
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:D.13, A:G.40, A:A.299, A:T.300, A:T.301, A:R.305, A:R.305
- Salt bridges: A:D.13, A:R.303
HDA.8: 16 residues within 4Å:- Chain B: D.13, N.38, G.40, T.129, V.273, G.298, A.299, T.300, T.301, G.302, R.303, R.305
- Ligands: MG.6, NO3.7, IMP.9, GDP.10
10 PLIP interactions:10 interactions with chain B- Hydrogen bonds: B:D.13, B:G.40, B:A.299, B:T.300, B:T.300, B:T.301, B:R.305, B:R.305
- Salt bridges: B:D.13, B:R.303
- 2 x IMP: INOSINIC ACID(Non-covalent)
IMP.4: 23 residues within 4Å:- Chain A: W.11, G.12, D.13, N.38, A.39, G.40, I.126, G.127, T.128, T.129, G.130, G.134, Q.224, L.228, V.238, T.239, V.273, G.274, R.303
- Chain B: R.143
- Ligands: MG.1, NO3.2, HDA.3
18 PLIP interactions:15 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:D.13, A:N.38, A:T.129, A:T.129, A:Q.224, A:Q.224, A:V.273, A:V.273, A:R.303
- Water bridges: A:T.129, A:G.130, A:G.134, A:G.134, A:R.272, A:A.275, B:R.143, B:R.143
- Salt bridges: B:R.143
IMP.9: 23 residues within 4Å:- Chain A: R.143
- Chain B: W.11, G.12, D.13, N.38, A.39, G.40, I.126, G.127, T.128, T.129, G.130, G.134, Q.224, L.228, V.238, T.239, V.273, G.274, R.303
- Ligands: MG.6, NO3.7, HDA.8
18 PLIP interactions:15 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:D.13, B:N.38, B:T.129, B:T.129, B:Q.224, B:Q.224, B:V.273, B:V.273, B:R.303
- Water bridges: B:T.129, B:G.130, B:G.134, B:G.134, B:R.272, B:A.275, A:R.143, A:R.143
- Salt bridges: A:R.143
- 2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
GDP.5: 22 residues within 4Å:- Chain A: D.13, E.14, G.15, K.16, G.17, K.18, G.40, H.41, T.42, V.44, Q.293, R.305, K.331, D.333, V.334, S.414, T.415, G.416, P.417
- Ligands: MG.1, NO3.2, HDA.3
18 PLIP interactions:18 interactions with chain A- Hydrogen bonds: A:D.13, A:G.15, A:K.16, A:G.17, A:G.40, A:T.42, A:K.331, A:K.331, A:S.414, A:G.416
- Water bridges: A:K.18, A:R.305, A:R.305, A:R.305
- Salt bridges: A:K.16, A:H.41, A:R.305, A:D.333
GDP.10: 22 residues within 4Å:- Chain B: D.13, E.14, G.15, K.16, G.17, K.18, G.40, H.41, T.42, V.44, Q.293, R.305, K.331, D.333, V.334, S.414, T.415, G.416, P.417
- Ligands: MG.6, NO3.7, HDA.8
19 PLIP interactions:19 interactions with chain B- Hydrogen bonds: B:D.13, B:E.14, B:G.15, B:K.16, B:G.17, B:G.40, B:T.42, B:K.331, B:K.331, B:S.414, B:G.416
- Water bridges: B:K.18, B:R.305, B:R.305, B:R.305
- Salt bridges: B:K.16, B:H.41, B:R.305, B:D.333
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Poland, B.W. et al., Crystal structures of adenylosuccinate synthetase from Escherichia coli complexed with GDP, IMP hadacidin, NO3-, and Mg2+. J.Mol.Biol. (1996)
- Release Date
- 1996-12-23
- Peptides
- ADENYLOSUCCINATE SYNTHETASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x NO3: NITRATE ION(Non-functional Binders)
- 2 x HDA: HADACIDIN(Non-covalent)
- 2 x IMP: INOSINIC ACID(Non-covalent)
- 2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Poland, B.W. et al., Crystal structures of adenylosuccinate synthetase from Escherichia coli complexed with GDP, IMP hadacidin, NO3-, and Mg2+. J.Mol.Biol. (1996)
- Release Date
- 1996-12-23
- Peptides
- ADENYLOSUCCINATE SYNTHETASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A