- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.1: 11 residues within 4Å:- Chain A: G.12, D.13, K.16, A.39, G.40, H.41, A.223, Q.224
- Ligands: MG.2, GDP.3, RPD.4
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:D.13, A:G.40, A:G.40, A:Q.224, A:Q.224
- Salt bridges: A:K.16, A:H.41
PO4.5: 11 residues within 4Å:- Chain B: G.12, D.13, K.16, A.39, G.40, H.41, A.223, Q.224
- Ligands: MG.6, GDP.7, RPD.8
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:D.13, B:G.40, B:G.40, B:Q.224, B:Q.224
- Salt bridges: B:K.16, B:H.41
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 5 residues within 4Å:- Chain A: D.13, G.40
- Ligands: PO4.1, GDP.3, RPD.4
2 PLIP interactions:2 interactions with chain A- Metal complexes: A:D.13, A:G.40
MG.6: 5 residues within 4Å:- Chain B: D.13, G.40
- Ligands: PO4.5, GDP.7, RPD.8
2 PLIP interactions:2 interactions with chain B- Metal complexes: B:D.13, B:G.40
- 2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
GDP.3: 21 residues within 4Å:- Chain A: D.13, E.14, G.15, K.16, G.17, K.18, G.40, H.41, T.42, A.299, R.305, K.331, D.333, V.334, S.414, T.415, G.416, P.417
- Ligands: PO4.1, MG.2, RPD.4
17 PLIP interactions:17 interactions with chain A- Hydrogen bonds: A:D.13, A:E.14, A:G.15, A:K.16, A:G.17, A:T.42, A:T.42, A:K.331, A:S.414, A:G.416
- Water bridges: A:K.18, A:R.305, A:R.305
- Salt bridges: A:K.16, A:H.41, A:R.305, A:D.333
GDP.7: 21 residues within 4Å:- Chain B: D.13, E.14, G.15, K.16, G.17, K.18, G.40, H.41, T.42, A.299, R.305, K.331, D.333, V.334, S.414, T.415, G.416, P.417
- Ligands: PO4.5, MG.6, RPD.8
18 PLIP interactions:18 interactions with chain B- Hydrogen bonds: B:D.13, B:E.14, B:E.14, B:G.15, B:K.16, B:G.17, B:T.42, B:T.42, B:K.331, B:S.414, B:G.416
- Water bridges: B:K.18, B:R.305, B:R.305
- Salt bridges: B:K.16, B:H.41, B:R.305, B:D.333
- 2 x RPD: (C8-R)-HYDANTOCIDIN 5'-PHOSPHATE(Non-covalent)
RPD.4: 23 residues within 4Å:- Chain A: D.13, N.38, G.40, I.126, G.127, T.128, T.129, Q.224, L.228, V.238, T.239, V.273, G.274, G.298, A.299, T.300, T.301, R.303, R.305
- Chain B: R.143
- Ligands: PO4.1, MG.2, GDP.3
23 PLIP interactions:20 interactions with chain A, 3 interactions with chain B- Hydrophobic interactions: A:V.273
- Hydrogen bonds: A:N.38, A:G.40, A:G.40, A:I.126, A:G.127, A:T.129, A:Q.224, A:A.299, A:T.300, A:T.300, A:T.301, A:R.303, A:R.305
- Water bridges: A:G.130, A:I.133, A:S.240, A:R.272, B:R.143, B:R.143
- Salt bridges: A:D.13, A:R.303, B:R.143
RPD.8: 23 residues within 4Å:- Chain A: R.143
- Chain B: D.13, N.38, G.40, I.126, G.127, T.128, T.129, Q.224, L.228, V.238, T.239, V.273, G.274, G.298, A.299, T.300, T.301, R.303, R.305
- Ligands: PO4.5, MG.6, GDP.7
23 PLIP interactions:20 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: B:V.273
- Hydrogen bonds: B:N.38, B:G.40, B:G.40, B:I.126, B:G.127, B:T.129, B:Q.224, B:T.239, B:A.299, B:T.300, B:T.301, B:R.303, B:R.305
- Water bridges: B:G.130, B:I.133, B:S.240, B:R.272, A:R.143, A:R.143
- Salt bridges: B:D.13, B:R.303, A:R.143
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hanessian, S. et al., An enzyme-bound bisubstrate hybrid inhibitor of adenylosuccinate synthetase. Angew.Chem.Int.Ed.Engl. (1999)
- Release Date
- 1999-12-02
- Peptides
- PROTEIN (ADENYLOSUCCINATE SYNTHETASE): AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x PO4: PHOSPHATE ION(Non-functional Binders)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x RPD: (C8-R)-HYDANTOCIDIN 5'-PHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hanessian, S. et al., An enzyme-bound bisubstrate hybrid inhibitor of adenylosuccinate synthetase. Angew.Chem.Int.Ed.Engl. (1999)
- Release Date
- 1999-12-02
- Peptides
- PROTEIN (ADENYLOSUCCINATE SYNTHETASE): AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A