SMTL ID : 1jbo.1

The 1.45A Three-Dimensional Structure of c-Phycocyanin from the Thermophylic Cyanobacterium Synechococcus elongatus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

hetero-6-6-mer

Ligands

18 x CYC: PHYCOCYANOBILIN(Non-covalent)

CYC.1: 24 residues within 4Å: Chain A: V.59, Y.60, T.66, S.72, Q.73, Y.74, A.75, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, F.122, L.124, W.128, Y.129 Chain F: R.57, I.67, Y.74, T.75, N.76, M.79 Ligand excluded by PLIP CYC.2: 19 residues within 4Å: Chain B: L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, M.86, I.88, Y.92, R.108, C.109, Y.117, L.120, T.122, P.123, S.126 Ligand excluded by PLIP CYC.3: 17 residues within 4Å: Chain A: N.21, L.24, D.28 Chain B: N.35, K.36, L.38, D.39, A.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Chain I: R.33, Q.145 Ligand excluded by PLIP CYC.4: 24 residues within 4Å: Chain B: R.57, I.67, Y.74, T.75, N.76, M.79 Chain C: V.59, Y.60, T.66, S.72, Q.73, Y.74, A.75, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, F.122, L.124, W.128, Y.129 Ligand excluded by PLIP CYC.5: 19 residues within 4Å: Chain D: L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, M.86, I.88, Y.92, R.108, C.109, Y.117, L.120, T.122, P.123, S.126 Ligand excluded by PLIP CYC.6: 17 residues within 4Å: Chain C: N.21, L.24, D.28 Chain D: N.35, K.36, L.38, D.39, A.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Chain G: R.33, Q.145 Ligand excluded by PLIP CYC.7: 24 residues within 4Å: Chain D: R.57, I.67, Y.74, T.75, N.76, M.79 Chain E: V.59, Y.60, T.66, S.72, Q.73, Y.74, A.75, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, F.122, L.124, W.128, Y.129 Ligand excluded by PLIP CYC.8: 19 residues within 4Å: Chain F: L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, M.86, I.88, Y.92, R.108, C.109, Y.117, L.120, T.122, P.123, S.126 Ligand excluded by PLIP CYC.9: 17 residues within 4Å: Chain E: N.21, L.24, D.28 Chain F: N.35, K.36, L.38, D.39, A.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Chain K: R.33, Q.145 Ligand excluded by PLIP CYC.10: 24 residues within 4Å: Chain G: V.59, Y.60, T.66, S.72, Q.73, Y.74, A.75, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, F.122, L.124, W.128, Y.129 Chain L: R.57, I.67, Y.74, T.75, N.76, M.79 Ligand excluded by PLIP CYC.11: 19 residues within 4Å: Chain H: L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, M.86, I.88, Y.92, R.108, C.109, Y.117, L.120, T.122, P.123, S.126 Ligand excluded by PLIP CYC.12: 17 residues within 4Å: Chain C: R.33, Q.145 Chain G: N.21, L.24, D.28 Chain H: N.35, K.36, L.38, D.39, A.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Ligand excluded by PLIP CYC.13: 24 residues within 4Å: Chain H: R.57, I.67, Y.74, T.75, N.76, M.79 Chain I: V.59, Y.60, T.66, S.72, Q.73, Y.74, A.75, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, F.122, L.124, W.128, Y.129 Ligand excluded by PLIP CYC.14: 19 residues within 4Å: Chain J: L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, M.86, I.88, Y.92, R.108, C.109, Y.117, L.120, T.122, P.123, S.126 Ligand excluded by PLIP CYC.15: 17 residues within 4Å: Chain A: R.33, Q.145 Chain I: N.21, L.24, D.28 Chain J: N.35, K.36, L.38, D.39, A.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Ligand excluded by PLIP CYC.16: 24 residues within 4Å: Chain J: R.57, I.67, Y.74, T.75, N.76, M.79 Chain K: V.59, Y.60, T.66, S.72, Q.73, Y.74, A.75, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, F.122, L.124, W.128, Y.129 Ligand excluded by PLIP CYC.17: 19 residues within 4Å: Chain L: L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, M.86, I.88, Y.92, R.108, C.109, Y.117, L.120, T.122, P.123, S.126 Ligand excluded by PLIP CYC.18: 17 residues within 4Å: Chain E: R.33, Q.145 Chain K: N.21, L.24, D.28 Chain L: N.35, K.36, L.38, D.39, A.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nield, J. et al., The 1.45A three-dimensional structure of C-phycocyanin from the thermophilic cyanobacterium Synechococcus elongatus. J.STRUCT.BIOL. (2003)

Release Date

2003-03-18

Peptides

C-Phycocyanin alpha chain: ACEGIK
C-Phycocyanin beta chain: BDFHJL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

E
A

G
A

I
A

K
A

B
B

D
B

F
B

H
B

J
B

L
B

C-Phycocyanin alpha chain

C-Phycocyanin beta chain

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