SMTL ID : 1jdj.1

CRYSTAL STRUCTURE OF LEISHMANIA MEXICANA GLYCEROL-3-PHOSPHATE DEHYDROGENASE IN COMPLEX WITH 2-FLUORO-6-CHLOROPURINE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x CFP: 6-CHLORO-2-FLUOROPURINE(Non-covalent)

CFP.1: 4 residues within 4Å: Chain A: W.44, M.46, I.93, F.97 2 PLIP interactions: 2 interactions with chain A pi-Stacking: A:F.97, A:F.97 CFP.3: 4 residues within 4Å: Chain B: W.44, M.46, I.93, F.97 2 PLIP interactions: 2 interactions with chain B pi-Stacking: B:F.97, B:F.97

2 x MYS: PENTADECANE(Non-covalent)

MYS.2: 10 residues within 4Å: Chain A: G.216, V.219, M.225, A.229, L.233, P.320, L.342, C.345 Chain B: F.165, W.195 6 PLIP interactions: 3 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:V.219, A:L.233, A:P.320, B:F.165, B:W.195, B:W.195 MYS.4: 10 residues within 4Å: Chain A: F.165, W.195 Chain B: G.216, V.219, M.225, A.229, L.233, P.320, L.342, C.345 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:V.219, B:L.233, B:P.320, A:F.165, A:W.195, A:W.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Choe, J. et al., Anomalous differences of light elements in determining precise binding modes of ligands to glycerol-3-phosphate dehydrogenase. Chem.Biol. (2002)

Release Date

2002-06-14

Peptides

GLYCEROL-3-PHOSPHATE DEHYDROGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

GLYCEROL-3-PHOSPHATE DEHYDROGENASE

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