SMTL ID : 1jot.1

STRUCTURE OF THE LECTIN MPA COMPLEXED WITH T-ANTIGEN DISACCHARIDE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-4-4-mer

Ligands

4 x A2G- GAL: beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose(Non-covalent)

A2G-GAL.1: 7 residues within 4Å: Chain A: G.1, F.47, Y.78, G.121, Y.122, W.123, D.125 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.1, A:G.1, A:G.121, A:Y.122, A:W.123, A:W.123 Water bridges: A:T.79 A2G-GAL.2: 7 residues within 4Å: Chain C: G.1, F.47, Y.78, G.121, Y.122, W.123, D.125 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:G.1, C:G.1, C:G.121, C:Y.122, C:W.123, C:W.123 Water bridges: C:T.79 A2G-GAL.3: 7 residues within 4Å: Chain E: G.1, F.47, Y.78, G.121, Y.122, W.123, D.125 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:G.1, E:G.1, E:G.121, E:Y.122, E:W.123, E:W.123 Water bridges: E:T.79 A2G-GAL.4: 7 residues within 4Å: Chain G: G.1, F.47, Y.78, G.121, Y.122, W.123, D.125 1 PLIP interactions: 1 interactions with chain G Hydrogen bonds: G:G.1, G:G.1, G:G.121, G:Y.122, G:W.123, G:W.123 Water bridges: G:T.79

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, X. et al., Structure of the complex of Maclura pomifera agglutinin and the T-antigen disaccharide, Galbeta1,3GalNAc. J.Biol.Chem. (1998)

Release Date

1998-12-30

Peptides

AGGLUTININ: ACEG
AGGLUTININ: BDFH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

E
A

G
A

B
B

D
B

F
B

H
B

AGGLUTININ

AGGLUTININ

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