SMTL ID : 3llz.3 (2 other biounits)

Crystal Structure Analysis of Maclura pomifera agglutinin complex with Gal-beta-1,3-GalNAc

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NGA- GAL: beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose(Non-covalent)

NGA-GAL.1: 7 residues within 4Å: Chain A: G.1, F.47, Y.78, G.121, Y.122, W.123, D.125 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.1, A:G.1, A:G.1, A:G.121, A:Y.122, A:W.123, A:W.123 Water bridges: A:G.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, J. et al., Characterization of the secondary binding sites of Maclura pomifera agglutinin by glycan array and crystallographic analyses. Glycobiology (2010)

Release Date

2010-09-22

Peptides

Agglutinin alpha chain: A
Agglutinin beta-2 chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Agglutinin alpha chain

Agglutinin beta-2 chain

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