SMTL ID : 1jsd.1 (1 other biounit)

CRYSTAL STRUCTURE OF SWINE H9 HAEMAGGLUTININ

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-mer

Ligands

4 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 6 residues within 4Å: Chain A: I.121, W.122, N.123, I.153, Q.154, D.155 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 3 residues within 4Å: Chain A: V.269, Q.271, N.280 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 4 residues within 4Å: Chain A: T.35, R.276, N.287, K.303 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 5 residues within 4Å: Chain B: Q.147, E.150, T.151, N.154, T.156 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.5: 1 residues within 4Å: Chain A: N.11 No protein-ligand interaction detected (PLIP)

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.6: 2 residues within 4Å: Chain B: L.102, K.106 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:K.106

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ha, Y. et al., H5 avian and H9 swine influenza virus haemagglutinin structures: possible origin of influenza subtypes. EMBO J. (2002)

Release Date

2001-09-26

Peptides

HAEMAGGLUTININ (HA1 CHAIN): A
HAEMAGGLUTININ (HA2 CHAIN): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HAEMAGGLUTININ (HA1 CHAIN)

HAEMAGGLUTININ (HA2 CHAIN)

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