SMTL ID : 1jt1.1

FEZ-1 metallo-beta-lactamase from Legionella gormanii modelled with D-captopril

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: D.75, H.76, H.215 Ligands: ZN.2, SO4.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.75, A:H.76, A:H.215 ZN.2: 5 residues within 4Å: Chain A: H.71, H.73, H.149 Ligands: ZN.1, SO4.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.71, A:H.73, A:H.149

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 10 residues within 4Å: Chain A: H.71, H.73, D.75, H.76, H.149, N.178, H.215 Ligands: ZN.1, ZN.2, MCO.8 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.178 Salt bridges: A:H.73, A:H.149, A:H.215 SO4.4: 6 residues within 4Å: Chain A: K.51, K.55, F.59, K.60, F.61, S.62 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:F.61, A:S.62 Water bridges: A:K.51, A:S.62 Salt bridges: A:K.55 SO4.5: 1 residues within 4Å: Chain A: R.34 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.34 SO4.6: 2 residues within 4Å: Chain A: T.240, K.243 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.240 Water bridges: A:K.243 Salt bridges: A:K.243

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.7: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

1 x MCO: 1-(3-MERCAPTO-2-METHYL-PROPIONYL)-PYRROLIDINE-2-CARBOXYLIC ACID(Non-covalent)

MCO.8: 8 residues within 4Å: Chain A: H.149, S.174, G.176, M.218, Y.245, K.249, D.252 Ligands: SO4.3 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.245 Hydrogen bonds: A:K.249 Water bridges: A:V.177, A:V.177 Salt bridges: A:K.249

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.9: 5 residues within 4Å: Chain A: M.92, K.126, R.133, V.134, E.135 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.126, A:E.135, A:E.135 Water bridges: A:R.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garcia-Saez, I. et al., Three-dimensional Structure of FEZ-1, a Monomeric Subclass B3 Metallo-[beta]-lactamase from Fluoribacter gormanii, in Native Form and in Complex with -Captopril. J.MOL.BIOL. (2003)

Release Date

2003-01-21

Peptides

FEZ-1, class B3 metallo-beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

FEZ-1, class B3 metallo-beta-lactamase

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