SMTL ID : 1mqt.1 (4 other biounits)

Swine Vesicular Disease Virus coat protein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x SPL: OCTANOIC ACID (2-HYDROXY-1-HYDROXYMETHYL-HEPTADEC-3-ENYL)-AMIDE(Non-covalent)

SPL.1: 22 residues within 4Å: Chain A: I.94, R.97, F.114, L.116, L.118, Y.145, S.168, V.169, M.180, I.182, I.185, G.186, I.187, Y.191, S.192, M.193, I.209, L.212, N.213, S.214, M.215 Chain C: A.24 14 PLIP interactions: 13 interactions with chain A, 1 interactions with chain C Hydrophobic interactions: A:I.94, A:F.114, A:L.116, A:L.118, A:Y.145, A:Y.145, A:Y.145, A:V.169, A:I.185, A:I.187, A:Y.191, A:L.212, C:A.24 Hydrogen bonds: A:R.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Verdaguer, N. et al., STRUCTURE OF SWINE VESICULAR DISEASE VIRUS: MAPPING OF CHANGES OCCURRING DURING ADAPTATION OF HUMAN COXSACKIE B5 VIRUS TO INFECT SWINE. J.Virol. (2003)

Release Date

2004-03-02

Peptides

Polyprotein: A
Polyprotein Capsid Protein: B
Polyprotein Capsid Protein: C
Polyprotein Capsid Protein: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Polyprotein

Polyprotein Capsid Protein

Polyprotein Capsid Protein

Polyprotein Capsid Protein

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