- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)
APC.5: 22 residues within 4Å:- Chain A: P.38, T.39, M.40, H.44, G.46, H.47, L.50, Y.82, F.157, G.158, K.160, D.161, Q.164, P.185, T.186, V.187, M.195, S.196, S.197, R.198
- Ligands: MG.3, GOL.9
15 PLIP interactions:15 interactions with chain A- Hydrogen bonds: A:M.40, A:Y.82, A:G.158, A:K.160, A:K.160, A:D.161, A:D.161, A:Q.164, A:V.187, A:V.187, A:M.195, A:S.197, A:R.198
- Salt bridges: A:K.160, A:R.198
APC.6: 21 residues within 4Å:- Chain B: P.38, M.40, H.44, G.46, H.47, L.50, Y.82, F.157, G.158, K.160, D.161, Q.164, P.185, T.186, V.187, M.195, S.196, S.197, R.198
- Ligands: MG.4, GOL.7
17 PLIP interactions:17 interactions with chain B- Hydrogen bonds: B:M.40, B:Y.82, B:G.158, B:K.160, B:D.161, B:D.161, B:Q.164, B:V.187, B:M.195, B:M.195, B:S.197, B:R.198
- Water bridges: B:S.197, B:S.197, B:R.198
- Salt bridges: B:K.160, B:R.198
- 5 x GOL: GLYCEROL(Non-functional Binders)
GOL.7: 5 residues within 4Å:- Chain B: Q.72, V.139, V.142, Q.164
- Ligands: APC.6
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:Q.72, B:Q.72, B:Q.164
GOL.8: 10 residues within 4Å:- Chain A: M.109, Y.110, P.111, D.112, G.113, L.114, R.115, T.116, K.145
- Chain B: D.174
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:Y.110, A:D.112, A:R.115, A:K.145
- Water bridges: B:D.174
GOL.9: 7 residues within 4Å:- Chain A: M.40, Q.72, V.139, V.142, V.143, Q.164
- Ligands: APC.5
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.72, A:Q.164
GOL.10: 5 residues within 4Å:- Chain A: L.114, R.115, T.117
- Chain B: Q.119, P.120
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:R.115
- Water bridges: B:Q.119
GOL.11: 3 residues within 4Å:- Chain A: Q.148, I.149
- Chain B: N.176
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:N.176, B:N.176
- 4 x EOH: ETHANOL(Non-functional Binders)
EOH.12: 2 residues within 4Å:- Chain B: H.222, T.225
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:T.225
EOH.13: 4 residues within 4Å:- Chain A: V.166, R.169, I.255, G.256
1 PLIP interactions:1 interactions with chain A- Water bridges: A:Q.170
EOH.14: 2 residues within 4Å:- Chain B: R.169, A.173
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:R.169
- Water bridges: B:A.173
EOH.15: 4 residues within 4Å:- Chain A: E.189, L.193, N.199, R.207
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:N.199
- Hydrogen bonds: A:E.189, A:N.199
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Wang, S. et al., Crystal structures of a pantothenate synthetase from M. tuberculosis and its
complexes with substrates and a
reaction intermediate. Protein Sci. (2003)
- Release Date
- 2003-04-22
- Peptides
- Pantothenate synthetase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)
- 5 x GOL: GLYCEROL(Non-functional Binders)
- 4 x EOH: ETHANOL(Non-functional Binders)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Wang, S. et al., Crystal structures of a pantothenate synthetase from M. tuberculosis and its
complexes with substrates and a
reaction intermediate. Protein Sci. (2003)
- Release Date
- 2003-04-22
- Peptides
- Pantothenate synthetase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B