SMTL ID : 1nf4.3 (2 other biounits)

X-Ray Structure of the Desulfovibrio desulfuricans bacterioferritin: the diiron site in different states (reduced structure)

FE2.1: 5 residues within 4Å: Chain A: E.23, E.56, H.59, E.132 Ligands: FE2.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.23, A:E.23, A:H.59, A:E.132, H2O.3 FE2.2: 5 residues within 4Å: Chain A: E.56, E.99, E.132, H.135 Ligands: FE2.1 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.56, A:E.99, A:E.99, A:E.132, A:H.135 FE2.8: 4 residues within 4Å: Chain B: E.23, E.56, H.59, E.132 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.23, B:E.56, B:H.59, B:E.132, H2O.6 FE2.9: 4 residues within 4Å: Chain B: E.56, E.99, E.132, H.135 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.56, B:E.99, B:E.99, B:E.132, B:H.135 FE2.14: 5 residues within 4Å: Chain C: E.23, E.56, H.59, E.132 Ligands: FE2.15 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:E.23, C:E.56, C:H.59, C:E.132, H2O.11 FE2.15: 5 residues within 4Å: Chain C: E.56, E.99, E.132, H.135 Ligands: FE2.14 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:E.56, C:E.99, C:E.132, C:H.135, H2O.12 FE2.19: 4 residues within 4Å: Chain D: E.23, E.56, H.59, E.132 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:E.23, D:E.56, D:H.59, D:E.132, H2O.14 FE2.20: 4 residues within 4Å: Chain D: E.56, E.99, E.132, H.135 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:E.56, D:E.99, D:E.99, D:E.132, D:H.135 FE2.24: 5 residues within 4Å: Chain E: E.23, E.56, H.59, E.132 Ligands: FE2.25 5 PLIP interactions: 4 interactions with chain E, 1 Ligand-Water interactions Metal complexes: E:E.23, E:E.56, E:H.59, E:E.132, H2O.18 FE2.25: 5 residues within 4Å: Chain E: E.56, E.99, E.132, H.135 Ligands: FE2.24 5 PLIP interactions: 5 interactions with chain E Metal complexes: E:E.56, E:E.99, E:E.99, E:E.132, E:H.135 FE2.29: 4 residues within 4Å: Chain F: E.23, E.56, H.59, E.132 5 PLIP interactions: 4 interactions with chain F, 1 Ligand-Water interactions Metal complexes: F:E.23, F:E.56, F:H.59, F:E.132, H2O.22 FE2.30: 4 residues within 4Å: Chain F: E.56, E.99, E.132, H.135 5 PLIP interactions: 5 interactions with chain F Metal complexes: F:E.56, F:E.99, F:E.99, F:E.132, F:H.135 FE2.36: 5 residues within 4Å: Chain G: E.23, E.56, H.59, E.132 Ligands: FE2.37 5 PLIP interactions: 4 interactions with chain G, 1 Ligand-Water interactions Metal complexes: G:E.23, G:E.56, G:H.59, G:E.132, H2O.24 FE2.37: 5 residues within 4Å: Chain G: E.56, E.99, E.132, H.135 Ligands: FE2.36 5 PLIP interactions: 5 interactions with chain G Metal complexes: G:E.56, G:E.99, G:E.99, G:E.132, G:H.135 FE2.41: 5 residues within 4Å: Chain H: E.23, E.56, H.59, E.132 Ligands: FE2.42 5 PLIP interactions: 4 interactions with chain H, 1 Ligand-Water interactions Metal complexes: H:E.23, H:E.56, H:H.59, H:E.132, H2O.27 FE2.42: 5 residues within 4Å: Chain H: E.56, E.99, E.132, H.135 Ligands: FE2.41 5 PLIP interactions: 5 interactions with chain H Metal complexes: H:E.56, H:E.99, H:E.99, H:E.132, H:H.135 FE2.47: 5 residues within 4Å: Chain I: E.23, E.56, H.59, E.132 Ligands: FE2.48 5 PLIP interactions: 4 interactions with chain I, 1 Ligand-Water interactions Metal complexes: I:E.23, I:E.23, I:H.59, I:E.132, H2O.33 FE2.48: 5 residues within 4Å: Chain I: E.56, E.99, E.132, H.135 Ligands: FE2.47 5 PLIP interactions: 5 interactions with chain I Metal complexes: I:E.56, I:E.99, I:E.99, I:E.132, I:H.135 FE2.54: 4 residues within 4Å: Chain J: E.23, E.56, H.59, E.132 5 PLIP interactions: 4 interactions with chain J, 1 Ligand-Water interactions Metal complexes: J:E.23, J:E.56, J:H.59, J:E.132, H2O.36 FE2.55: 4 residues within 4Å: Chain J: E.56, E.99, E.132, H.135 5 PLIP interactions: 5 interactions with chain J Metal complexes: J:E.56, J:E.99, J:E.99, J:E.132, J:H.135 FE2.60: 5 residues within 4Å: Chain K: E.23, E.56, H.59, E.132 Ligands: FE2.61 5 PLIP interactions: 4 interactions with chain K, 1 Ligand-Water interactions Metal complexes: K:E.23, K:E.56, K:H.59, K:E.132, H2O.41 FE2.61: 5 residues within 4Å: Chain K: E.56, E.99, E.132, H.135 Ligands: FE2.60 5 PLIP interactions: 4 interactions with chain K, 1 Ligand-Water interactions Metal complexes: K:E.56, K:E.99, K:E.132, K:H.135, H2O.42 FE2.65: 4 residues within 4Å: Chain L: E.23, E.56, H.59, E.132 5 PLIP interactions: 4 interactions with chain L, 1 Ligand-Water interactions Metal complexes: L:E.23, L:E.56, L:H.59, L:E.132, H2O.44 FE2.66: 4 residues within 4Å: Chain L: E.56, E.99, E.132, H.135 5 PLIP interactions: 5 interactions with chain L Metal complexes: L:E.56, L:E.99, L:E.99, L:E.132, L:H.135 FE2.70: 5 residues within 4Å: Chain M: E.23, E.56, H.59, E.132 Ligands: FE2.71 5 PLIP interactions: 4 interactions with chain M, 1 Ligand-Water interactions Metal complexes: M:E.23, M:E.56, M:H.59, M:E.132, H2O.48 FE2.71: 5 residues within 4Å: Chain M: E.56, E.99, E.132, H.135 Ligands: FE2.70 5 PLIP interactions: 5 interactions with chain M Metal complexes: M:E.56, M:E.99, M:E.99, M:E.132, M:H.135 FE2.75: 4 residues within 4Å: Chain N: E.23, E.56, H.59, E.132 5 PLIP interactions: 4 interactions with chain N, 1 Ligand-Water interactions Metal complexes: N:E.23, N:E.56, N:H.59, N:E.132, H2O.52 FE2.76: 4 residues within 4Å: Chain N: E.56, E.99, E.132, H.135 5 PLIP interactions: 5 interactions with chain N Metal complexes: N:E.56, N:E.99, N:E.99, N:E.132, N:H.135 FE2.82: 5 residues within 4Å: Chain O: E.23, E.56, H.59, E.132 Ligands: FE2.83 5 PLIP interactions: 4 interactions with chain O, 1 Ligand-Water interactions Metal complexes: O:E.23, O:E.56, O:H.59, O:E.132, H2O.54 FE2.83: 5 residues within 4Å: Chain O: E.56, E.99, E.132, H.135 Ligands: FE2.82 5 PLIP interactions: 5 interactions with chain O Metal complexes: O:E.56, O:E.99, O:E.99, O:E.132, O:H.135 FE2.87: 5 residues within 4Å: Chain P: E.23, E.56, H.59, E.132 Ligands: FE2.88 5 PLIP interactions: 4 interactions with chain P, 1 Ligand-Water interactions Metal complexes: P:E.23, P:E.56, P:H.59, P:E.132, H2O.57 FE2.88: 5 residues within 4Å: Chain P: E.56, E.99, E.132, H.135 Ligands: FE2.87 5 PLIP interactions: 5 interactions with chain P Metal complexes: P:E.56, P:E.99, P:E.99, P:E.132, P:H.135 FE2.93: 5 residues within 4Å: Chain Q: E.23, E.56, H.59, E.132 Ligands: FE2.94 5 PLIP interactions: 4 interactions with chain Q, 1 Ligand-Water interactions Metal complexes: Q:E.23, Q:E.23, Q:H.59, Q:E.132, H2O.63 FE2.94: 5 residues within 4Å: Chain Q: E.56, E.99, E.132, H.135 Ligands: FE2.93 5 PLIP interactions: 5 interactions with chain Q Metal complexes: Q:E.56, Q:E.99, Q:E.99, Q:E.132, Q:H.135 FE2.100: 4 residues within 4Å: Chain R: E.23, E.56, H.59, E.132 5 PLIP interactions: 4 interactions with chain R, 1 Ligand-Water interactions Metal complexes: R:E.23, R:E.56, R:H.59, R:E.132, H2O.66 FE2.101: 4 residues within 4Å: Chain R: E.56, E.99, E.132, H.135 5 PLIP interactions: 5 interactions with chain R Metal complexes: R:E.56, R:E.99, R:E.99, R:E.132, R:H.135 FE2.106: 5 residues within 4Å: Chain S: E.23, E.56, H.59, E.132 Ligands: FE2.107 5 PLIP interactions: 4 interactions with chain S, 1 Ligand-Water interactions Metal complexes: S:E.23, S:E.56, S:H.59, S:E.132, H2O.71 FE2.107: 5 residues within 4Å: Chain S: E.56, E.99, E.132, H.135 Ligands: FE2.106 5 PLIP interactions: 4 interactions with chain S, 1 Ligand-Water interactions Metal complexes: S:E.56, S:E.99, S:E.132, S:H.135, H2O.72 FE2.111: 4 residues within 4Å: Chain T: E.23, E.56, H.59, E.132 5 PLIP interactions: 4 interactions with chain T, 1 Ligand-Water interactions Metal complexes: T:E.23, T:E.56, T:H.59, T:E.132, H2O.74 FE2.112: 4 residues within 4Å: Chain T: E.56, E.99, E.132, H.135 5 PLIP interactions: 5 interactions with chain T Metal complexes: T:E.56, T:E.99, T:E.99, T:E.132, T:H.135 FE2.116: 5 residues within 4Å: Chain U: E.23, E.56, H.59, E.132 Ligands: FE2.117 5 PLIP interactions: 4 interactions with chain U, 1 Ligand-Water interactions Metal complexes: U:E.23, U:E.56, U:H.59, U:E.132, H2O.78 FE2.117: 5 residues within 4Å: Chain U: E.56, E.99, E.132, H.135 Ligands: FE2.116 5 PLIP interactions: 5 interactions with chain U Metal complexes: U:E.56, U:E.99, U:E.99, U:E.132, U:H.135 FE2.121: 4 residues within 4Å: Chain V: E.23, E.56, H.59, E.132 5 PLIP interactions: 4 interactions with chain V, 1 Ligand-Water interactions Metal complexes: V:E.23, V:E.56, V:H.59, V:E.132, H2O.82 FE2.122: 4 residues within 4Å: Chain V: E.56, E.99, E.132, H.135 5 PLIP interactions: 5 interactions with chain V Metal complexes: V:E.56, V:E.99, V:E.99, V:E.132, V:H.135 FE2.128: 5 residues within 4Å: Chain W: E.23, E.56, H.59, E.132 Ligands: FE2.129 5 PLIP interactions: 4 interactions with chain W, 1 Ligand-Water interactions Metal complexes: W:E.23, W:E.56, W:H.59, W:E.132, H2O.84 FE2.129: 5 residues within 4Å: Chain W: E.56, E.99, E.132, H.135 Ligands: FE2.128 5 PLIP interactions: 5 interactions with chain W Metal complexes: W:E.56, W:E.99, W:E.99, W:E.132, W:H.135 FE2.133: 5 residues within 4Å: Chain X: E.23, E.56, H.59, E.132 Ligands: FE2.134 5 PLIP interactions: 4 interactions with chain X, 1 Ligand-Water interactions Metal complexes: X:E.23, X:E.56, X:H.59, X:E.132, H2O.87 FE2.134: 5 residues within 4Å: Chain X: E.56, E.99, E.132, H.135 Ligands: FE2.133 5 PLIP interactions: 5 interactions with chain X Metal complexes: X:E.56, X:E.99, X:E.99, X:E.132, X:H.135

SO4.3: 5 residues within 4Å: Chain A: K.50, S.162, S.163, T.164, G.165 Ligand excluded by PLIP SO4.4: 2 residues within 4Å: Chain A: S.144, N.148 Ligand excluded by PLIP SO4.5: 5 residues within 4Å: Chain A: K.114 Chain I: K.114 Chain Q: K.114 Ligands: SO4.51, SO4.97 Ligand excluded by PLIP SO4.6: 3 residues within 4Å: Chain A: P.161, S.162, S.163 Ligand excluded by PLIP SO4.10: 6 residues within 4Å: Chain B: K.50, S.162, S.163, T.164, G.165 Ligands: FEC.7 Ligand excluded by PLIP SO4.11: 3 residues within 4Å: Chain B: S.144, K.147, N.148 Ligand excluded by PLIP SO4.12: 3 residues within 4Å: Chain B: P.161, S.162, S.163 Ligand excluded by PLIP SO4.13: 2 residues within 4Å: Chain C: K.114 Chain W: K.114 Ligand excluded by PLIP SO4.16: 3 residues within 4Å: Chain C: S.144, K.147, N.148 Ligand excluded by PLIP SO4.17: 3 residues within 4Å: Chain C: P.161, S.162, S.163 Ligand excluded by PLIP SO4.21: 5 residues within 4Å: Chain D: K.50, S.163, T.164, G.165 Ligands: FEC.18 Ligand excluded by PLIP SO4.22: 2 residues within 4Å: Chain D: N.4, R.5 Ligand excluded by PLIP SO4.23: 3 residues within 4Å: Chain D: P.161, S.162, S.163 Ligand excluded by PLIP SO4.26: 4 residues within 4Å: Chain E: K.50, S.163, T.164, G.165 Ligand excluded by PLIP SO4.27: 3 residues within 4Å: Chain E: S.144, K.147, N.148 Ligand excluded by PLIP SO4.28: 3 residues within 4Å: Chain E: P.161, S.162, S.163 Ligand excluded by PLIP SO4.31: 6 residues within 4Å: Chain F: K.50, S.162, S.163, T.164, G.165 Ligands: FEC.35 Ligand excluded by PLIP SO4.32: 2 residues within 4Å: Chain F: N.4, R.5 Ligand excluded by PLIP SO4.33: 5 residues within 4Å: Chain F: K.114 Chain N: K.114 Chain V: K.114 Ligands: SO4.79, SO4.125 Ligand excluded by PLIP SO4.34: 3 residues within 4Å: Chain F: P.161, S.162, S.163 Ligand excluded by PLIP SO4.38: 2 residues within 4Å: Chain G: S.144, N.148 Ligand excluded by PLIP SO4.39: 3 residues within 4Å: Chain G: P.161, S.162, S.163 Ligand excluded by PLIP SO4.40: 3 residues within 4Å: Chain D: K.114 Chain E: K.114 Chain H: K.114 Ligand excluded by PLIP SO4.43: 5 residues within 4Å: Chain H: K.50, S.163, T.164, G.165 Ligands: FEC.46 Ligand excluded by PLIP SO4.44: 3 residues within 4Å: Chain H: S.144, K.147, N.148 Ligand excluded by PLIP SO4.45: 3 residues within 4Å: Chain H: P.161, S.162, S.163 Ligand excluded by PLIP SO4.49: 5 residues within 4Å: Chain I: K.50, S.162, S.163, T.164, G.165 Ligand excluded by PLIP SO4.50: 2 residues within 4Å: Chain I: S.144, N.148 Ligand excluded by PLIP SO4.51: 5 residues within 4Å: Chain A: K.114 Chain I: K.114 Chain Q: K.114 Ligands: SO4.5, SO4.97 Ligand excluded by PLIP SO4.52: 3 residues within 4Å: Chain I: P.161, S.162, S.163 Ligand excluded by PLIP SO4.56: 6 residues within 4Å: Chain J: K.50, S.162, S.163, T.164, G.165 Ligands: FEC.53 Ligand excluded by PLIP SO4.57: 3 residues within 4Å: Chain J: S.144, K.147, N.148 Ligand excluded by PLIP SO4.58: 3 residues within 4Å: Chain J: P.161, S.162, S.163 Ligand excluded by PLIP SO4.59: 2 residues within 4Å: Chain G: K.114 Chain K: K.114 Ligand excluded by PLIP SO4.62: 3 residues within 4Å: Chain K: S.144, K.147, N.148 Ligand excluded by PLIP SO4.63: 3 residues within 4Å: Chain K: P.161, S.162, S.163 Ligand excluded by PLIP SO4.67: 5 residues within 4Å: Chain L: K.50, S.163, T.164, G.165 Ligands: FEC.64 Ligand excluded by PLIP SO4.68: 2 residues within 4Å: Chain L: N.4, R.5 Ligand excluded by PLIP SO4.69: 3 residues within 4Å: Chain L: P.161, S.162, S.163 Ligand excluded by PLIP SO4.72: 4 residues within 4Å: Chain M: K.50, S.163, T.164, G.165 Ligand excluded by PLIP SO4.73: 3 residues within 4Å: Chain M: S.144, K.147, N.148 Ligand excluded by PLIP SO4.74: 3 residues within 4Å: Chain M: P.161, S.162, S.163 Ligand excluded by PLIP SO4.77: 6 residues within 4Å: Chain N: K.50, S.162, S.163, T.164, G.165 Ligands: FEC.81 Ligand excluded by PLIP SO4.78: 2 residues within 4Å: Chain N: N.4, R.5 Ligand excluded by PLIP SO4.79: 5 residues within 4Å: Chain F: K.114 Chain N: K.114 Chain V: K.114 Ligands: SO4.33, SO4.125 Ligand excluded by PLIP SO4.80: 3 residues within 4Å: Chain N: P.161, S.162, S.163 Ligand excluded by PLIP SO4.84: 2 residues within 4Å: Chain O: S.144, N.148 Ligand excluded by PLIP SO4.85: 3 residues within 4Å: Chain O: P.161, S.162, S.163 Ligand excluded by PLIP SO4.86: 3 residues within 4Å: Chain L: K.114 Chain M: K.114 Chain P: K.114 Ligand excluded by PLIP SO4.89: 5 residues within 4Å: Chain P: K.50, S.163, T.164, G.165 Ligands: FEC.92 Ligand excluded by PLIP SO4.90: 3 residues within 4Å: Chain P: S.144, K.147, N.148 Ligand excluded by PLIP SO4.91: 3 residues within 4Å: Chain P: P.161, S.162, S.163 Ligand excluded by PLIP SO4.95: 5 residues within 4Å: Chain Q: K.50, S.162, S.163, T.164, G.165 Ligand excluded by PLIP SO4.96: 2 residues within 4Å: Chain Q: S.144, N.148 Ligand excluded by PLIP SO4.97: 5 residues within 4Å: Chain A: K.114 Chain I: K.114 Chain Q: K.114 Ligands: SO4.5, SO4.51 Ligand excluded by PLIP SO4.98: 3 residues within 4Å: Chain Q: P.161, S.162, S.163 Ligand excluded by PLIP SO4.102: 6 residues within 4Å: Chain R: K.50, S.162, S.163, T.164, G.165 Ligands: FEC.99 Ligand excluded by PLIP SO4.103: 3 residues within 4Å: Chain R: S.144, K.147, N.148 Ligand excluded by PLIP SO4.104: 3 residues within 4Å: Chain R: P.161, S.162, S.163 Ligand excluded by PLIP SO4.105: 2 residues within 4Å: Chain O: K.114 Chain S: K.114 Ligand excluded by PLIP SO4.108: 3 residues within 4Å: Chain S: S.144, K.147, N.148 Ligand excluded by PLIP SO4.109: 3 residues within 4Å: Chain S: P.161, S.162, S.163 Ligand excluded by PLIP SO4.113: 5 residues within 4Å: Chain T: K.50, S.163, T.164, G.165 Ligands: FEC.110 Ligand excluded by PLIP SO4.114: 2 residues within 4Å: Chain T: N.4, R.5 Ligand excluded by PLIP SO4.115: 3 residues within 4Å: Chain T: P.161, S.162, S.163 Ligand excluded by PLIP SO4.118: 4 residues within 4Å: Chain U: K.50, S.163, T.164, G.165 Ligand excluded by PLIP SO4.119: 3 residues within 4Å: Chain U: S.144, K.147, N.148 Ligand excluded by PLIP SO4.120: 3 residues within 4Å: Chain U: P.161, S.162, S.163 Ligand excluded by PLIP SO4.123: 6 residues within 4Å: Chain V: K.50, S.162, S.163, T.164, G.165 Ligands: FEC.127 Ligand excluded by PLIP SO4.124: 2 residues within 4Å: Chain V: N.4, R.5 Ligand excluded by PLIP SO4.125: 5 residues within 4Å: Chain F: K.114 Chain N: K.114 Chain V: K.114 Ligands: SO4.33, SO4.79 Ligand excluded by PLIP SO4.126: 3 residues within 4Å: Chain V: P.161, S.162, S.163 Ligand excluded by PLIP SO4.130: 2 residues within 4Å: Chain W: S.144, N.148 Ligand excluded by PLIP SO4.131: 3 residues within 4Å: Chain W: P.161, S.162, S.163 Ligand excluded by PLIP SO4.132: 3 residues within 4Å: Chain T: K.114 Chain U: K.114 Chain X: K.114 Ligand excluded by PLIP SO4.135: 5 residues within 4Å: Chain X: K.50, S.163, T.164, G.165 Ligands: FEC.138 Ligand excluded by PLIP SO4.136: 3 residues within 4Å: Chain X: S.144, K.147, N.148 Ligand excluded by PLIP SO4.137: 3 residues within 4Å: Chain X: P.161, S.162, S.163 Ligand excluded by PLIP

FEC.7: 22 residues within 4Å: Chain A: R.20, L.24, I.27, H.28, M.31, Y.35, K.50, M.57, R.58, E.61 Chain B: R.20, I.27, H.28, M.31, Y.35, K.50, M.57, E.61, A.167, S.168, K.169 Ligands: SO4.10 17 PLIP interactions: 10 interactions with chain A, 7 interactions with chain B, Hydrophobic interactions: A:L.24, A:I.27, A:M.31, A:R.58,