- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x UFP: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE(Non-covalent)
- 4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
FAD.2: 20 residues within 4Å:- Chain A: R.90, H.91, R.92, I.93, N.181, L.185, R.186, H.190
- Chain C: T.67, E.70, I.93, N.175, R.177
- Chain D: S.95, N.97, E.98, S.100, Y.103
- Ligands: FAD.5, UFP.8
26 PLIP interactions:16 interactions with chain A, 6 interactions with chain D, 4 interactions with chain C- Hydrophobic interactions: A:L.185, A:H.190, D:Y.103
- Hydrogen bonds: A:R.90, A:R.90, A:R.92, A:R.92, A:I.93, A:N.181, A:N.181, D:S.95, D:E.98, D:E.98, C:T.67, C:N.175
- Water bridges: A:R.90, A:R.92, A:R.92, D:A.94, D:Y.96, C:T.67
- Salt bridges: A:H.91, A:H.91, A:R.92, A:R.92, C:R.177
FAD.4: 22 residues within 4Å:- Chain B: R.90, H.91, R.92, I.93, N.181, L.185, R.186, H.190
- Chain C: S.95, N.97, E.98, S.100, Y.103
- Chain D: S.42, H.65, T.67, E.70, I.93, N.175, R.177
- Ligands: UFP.6, FAD.7
29 PLIP interactions:6 interactions with chain D, 5 interactions with chain C, 18 interactions with chain B- Hydrogen bonds: D:T.67, D:N.175, C:A.94, C:E.98, C:E.98, B:R.90, B:R.90, B:R.92, B:R.92, B:I.93, B:N.181, B:N.181
- Water bridges: D:E.66, D:T.67, C:A.94, C:Y.96, B:R.90, B:H.91, B:H.91, B:R.92, B:R.92
- Salt bridges: D:R.177, B:H.91, B:H.91, B:R.92, B:R.92
- pi-Stacking: D:H.65
- Hydrophobic interactions: B:L.185, B:H.190
FAD.5: 23 residues within 4Å:- Chain A: S.42, T.67, E.70, I.93, N.175, R.177
- Chain B: A.94, S.95, N.97, E.98, S.100, Y.103
- Chain C: R.90, H.91, R.92, I.93, N.181, L.185, R.186, H.190, A.191
- Ligands: FAD.2, UFP.3
32 PLIP interactions:18 interactions with chain C, 6 interactions with chain B, 8 interactions with chain A- Hydrophobic interactions: C:L.185, C:H.190
- Hydrogen bonds: C:R.90, C:R.90, C:R.92, C:R.92, C:I.93, C:N.181, C:N.181, B:A.94, B:E.98, B:E.98, A:N.175
- Water bridges: C:R.90, C:H.91, C:H.91, C:R.92, C:R.92, B:A.94, B:Y.96, B:Y.96, A:H.65, A:T.67, A:T.67, A:R.177, A:R.177
- Salt bridges: C:H.91, C:H.91, C:R.92, C:R.92, A:R.177
- pi-Cation interactions: A:H.65
FAD.7: 23 residues within 4Å:- Chain A: A.94, S.95, N.97, E.98, S.100, Y.103
- Chain B: S.42, T.67, E.70, I.93, N.175, R.177
- Chain D: R.90, H.91, R.92, I.93, N.181, L.185, R.186, H.190, A.191
- Ligands: UFP.1, FAD.4
25 PLIP interactions:16 interactions with chain D, 5 interactions with chain B, 4 interactions with chain A- Hydrophobic interactions: D:L.185, D:H.190
- Hydrogen bonds: D:R.90, D:R.90, D:R.92, D:R.92, D:I.93, D:N.181, D:N.181, B:N.175, A:S.95, A:E.98, A:E.98
- Water bridges: D:R.90, D:R.92, D:R.92, B:S.42, B:R.177, B:R.177, A:Y.96
- Salt bridges: D:H.91, D:H.91, D:R.92, D:R.92, B:R.177
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mathews, I.I. et al., Functional Analysis of Substrate and Cofactor Complex Structures of a Thymidylate Synthase-Complementing Protein. Structure (2003)
- Release Date
- 2003-06-24
- Peptides
- Thymidylate synthase thyX: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x UFP: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE(Non-covalent)
- 4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mathews, I.I. et al., Functional Analysis of Substrate and Cofactor Complex Structures of a Thymidylate Synthase-Complementing Protein. Structure (2003)
- Release Date
- 2003-06-24
- Peptides
- Thymidylate synthase thyX: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D