- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 12 x SO4: SULFATE ION(Non-functional Binders)
- 4 x THM: THYMIDINE(Non-covalent)
THM.4: 10 residues within 4Å:- Chain A: Y.16, E.42, W.47, I.56, Y.60, Q.84, F.87, R.121, S.126, F.130
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:Y.16, A:W.47, A:F.130
- Hydrogen bonds: A:E.42, A:Q.84, A:Q.84, A:R.121
- Water bridges: A:R.134, A:R.134
- pi-Stacking: A:F.87, A:F.130
THM.8: 10 residues within 4Å:- Chain B: Y.16, E.42, W.47, I.56, Q.84, F.87, R.121, S.126, F.130, E.183
13 PLIP interactions:13 interactions with chain B- Hydrophobic interactions: B:Y.16, B:W.47, B:F.130
- Hydrogen bonds: B:E.42, B:Q.84, B:Q.84, B:R.121, B:E.183
- Water bridges: B:R.134, B:R.178, B:Q.184
- pi-Stacking: B:F.87, B:F.130
THM.12: 10 residues within 4Å:- Chain C: Y.16, E.42, W.47, I.56, Y.60, Q.84, F.87, R.121, S.126, F.130
12 PLIP interactions:12 interactions with chain C- Hydrophobic interactions: C:Y.16, C:W.47, C:F.130
- Hydrogen bonds: C:E.42, C:Y.60, C:Q.84, C:Q.84, C:R.121
- Water bridges: C:R.134, C:R.134
- pi-Stacking: C:F.87, C:F.130
THM.16: 10 residues within 4Å:- Chain D: Y.16, E.42, W.47, I.56, Q.84, F.87, R.121, S.126, F.130, E.183
14 PLIP interactions:14 interactions with chain D- Hydrophobic interactions: D:Y.16, D:W.47, D:F.130
- Hydrogen bonds: D:E.42, D:Q.84, D:Q.84, D:R.121, D:E.183, D:E.183
- Water bridges: D:R.134, D:R.178, D:Q.184
- pi-Stacking: D:F.87, D:F.130
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gardberg, A. et al., Structural basis for the dual thymidine and thymidylate kinase activity of herpes thymidine kinases. Structure (2003)
- Release Date
- 2003-11-04
- Peptides
- Thymidine kinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 12 x SO4: SULFATE ION(Non-functional Binders)
- 4 x THM: THYMIDINE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gardberg, A. et al., Structural basis for the dual thymidine and thymidylate kinase activity of herpes thymidine kinases. Structure (2003)
- Release Date
- 2003-11-04
- Peptides
- Thymidine kinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B