- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.70 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 2 x 4TA: P1-(5'-ADENOSYL)P4-(5'-(2'-DEOXY-THYMIDYL))TETRAPHOSPHATE(Non-covalent)
4TA.5: 22 residues within 4Å:- Chain A: Y.16, G.17, I.18, G.19, K.20, S.21, T.22, E.42, M.44, W.47, I.56, Q.84, F.87, R.121, S.126, F.130, R.174, R.178, G.292, T.293, P.294, C.297
25 PLIP interactions:25 interactions with chain A- Hydrophobic interactions: A:Y.16, A:W.47, A:F.130
- Hydrogen bonds: A:G.17, A:I.18, A:G.19, A:K.20, A:S.21, A:S.21, A:T.22, A:T.22, A:E.42, A:Q.84, A:Q.84, A:R.178, A:R.178, A:G.292
- Salt bridges: A:K.20, A:K.20, A:K.20, A:R.121, A:R.178
- pi-Stacking: A:F.87, A:F.130
- pi-Cation interactions: A:R.174
4TA.10: 21 residues within 4Å:- Chain B: Y.16, G.17, I.18, G.19, K.20, S.21, T.22, E.42, Y.60, Q.84, F.87, R.121, A.125, S.126, F.130, R.174, R.178, G.292, T.293, P.294, C.297
22 PLIP interactions:22 interactions with chain B- Hydrophobic interactions: B:Y.16, B:F.130
- Hydrogen bonds: B:G.17, B:I.18, B:G.19, B:K.20, B:S.21, B:S.21, B:T.22, B:T.22, B:E.42, B:Y.60, B:Q.84, B:Q.84, B:G.292
- Salt bridges: B:K.20, B:K.20, B:K.20, B:R.121
- pi-Stacking: B:F.87, B:F.130
- pi-Cation interactions: B:R.174
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gardberg, A. et al., Structural basis for the dual thymidine and thymidylate kinase activity of herpes thymidine kinases. Structure (2003)
- Release Date
- 2003-11-04
- Peptides
- Thymidine kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.70 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 2 x 4TA: P1-(5'-ADENOSYL)P4-(5'-(2'-DEOXY-THYMIDYL))TETRAPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gardberg, A. et al., Structural basis for the dual thymidine and thymidylate kinase activity of herpes thymidine kinases. Structure (2003)
- Release Date
- 2003-11-04
- Peptides
- Thymidine kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B