- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
NAD.2: 19 residues within 4Å:- Chain A: V.159, G.181, P.182, I.183, T.202, D.203, L.204, R.208, I.223, C.249, T.250, A.252, V.272, G.273, L.274, V.296, F.297, R.298
- Ligands: 572.3
18 PLIP interactions:18 interactions with chain A- Hydrophobic interactions: A:V.159, A:I.183
- Hydrogen bonds: A:G.181, A:I.183, A:L.204, A:R.208, A:R.208, A:T.250, A:L.274, A:V.296, A:R.298
- Water bridges: A:G.45, A:G.45, A:G.181, A:G.184, A:T.202, A:V.296
- Salt bridges: A:R.208
NAD.5: 20 residues within 4Å:- Chain B: V.159, G.181, P.182, I.183, T.202, D.203, L.204, R.208, I.223, C.249, T.250, A.252, S.255, V.272, G.273, L.274, V.296, F.297, R.298
- Ligands: 572.6
17 PLIP interactions:17 interactions with chain B- Hydrophobic interactions: B:V.159, B:I.183
- Hydrogen bonds: B:G.181, B:I.183, B:L.204, B:R.208, B:R.208, B:T.250, B:L.274, B:V.296, B:R.298
- Water bridges: B:G.45, B:G.45, B:G.181, B:G.184, B:V.296
- Salt bridges: B:R.208
NAD.8: 19 residues within 4Å:- Chain C: V.159, G.181, P.182, I.183, T.202, D.203, L.204, R.208, I.223, C.249, T.250, A.252, V.272, G.273, L.274, V.296, F.297, R.298
- Ligands: 572.9
19 PLIP interactions:19 interactions with chain C- Hydrophobic interactions: C:V.159, C:I.183
- Hydrogen bonds: C:A.180, C:G.181, C:I.183, C:L.204, C:R.208, C:R.208, C:T.250, C:L.274, C:V.296, C:R.298
- Water bridges: C:G.45, C:G.181, C:G.184, C:T.202, C:A.254, C:V.296
- Salt bridges: C:R.208
NAD.11: 19 residues within 4Å:- Chain D: V.159, G.181, P.182, I.183, T.202, D.203, L.204, R.208, I.223, C.249, T.250, A.252, V.272, G.273, L.274, V.296, F.297, R.298
- Ligands: 572.12
17 PLIP interactions:17 interactions with chain D- Hydrophobic interactions: D:V.159, D:I.183
- Hydrogen bonds: D:G.181, D:I.183, D:L.204, D:R.208, D:R.208, D:T.250, D:L.274, D:V.296, D:R.298
- Water bridges: D:G.45, D:G.45, D:G.181, D:G.184, D:V.296
- Salt bridges: D:R.208
- 4 x 572: 4-[2-(HYDROXYMETHYL)PYRIMIDIN-4-YL]-N,N-DIMETHYLPIPERAZINE-1-SULFONAMIDE(Non-covalent)
572.3: 14 residues within 4Å:- Chain A: C.44, S.46, Y.50, I.56, F.59, H.69, F.118, T.121, E.155, L.274, F.297, R.298
- Ligands: ZN.1, NAD.2
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.46, A:E.155
- Water bridges: A:Y.50
- pi-Cation interactions: A:F.59
572.6: 14 residues within 4Å:- Chain B: C.44, S.46, Y.50, I.56, F.59, H.69, F.118, T.121, E.155, L.274, F.297, R.298
- Ligands: ZN.4, NAD.5
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:S.46, B:E.155
- pi-Cation interactions: B:F.59
572.9: 14 residues within 4Å:- Chain C: C.44, S.46, Y.50, I.56, F.59, H.69, F.118, T.121, E.155, L.274, F.297, R.298
- Ligands: ZN.7, NAD.8
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:S.46, C:E.155
- Water bridges: C:Y.50
- pi-Cation interactions: C:F.59
572.12: 14 residues within 4Å:- Chain D: C.44, S.46, Y.50, I.56, F.59, H.69, F.118, T.121, E.155, L.274, F.297, R.298
- Ligands: ZN.10, NAD.11
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:S.46, D:E.155
- pi-Cation interactions: D:F.59
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pauly, T.A. et al., X-ray crystallographic and kinetic studies of human sorbitol dehydrogenase. Structure (2003)
- Release Date
- 2004-02-17
- Peptides
- Sorbitol dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 4 x 572: 4-[2-(HYDROXYMETHYL)PYRIMIDIN-4-YL]-N,N-DIMETHYLPIPERAZINE-1-SULFONAMIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pauly, T.A. et al., X-ray crystallographic and kinetic studies of human sorbitol dehydrogenase. Structure (2003)
- Release Date
- 2004-02-17
- Peptides
- Sorbitol dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D