SMTL ID : 1ro9.1 (1 other biounit)

CRYSTAL STRUCTURES OF THE CATALYTIC DOMAIN OF PHOSPHODIESTERASE 4B2B COMPLEXED WITH 8-Br-AMP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.13 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.88, H.124, D.125, D.242 Ligands: 8BR.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.88, A:H.124, A:D.125, A:D.242 ZN.2: 2 residues within 4Å: Chain A: D.125 Ligands: 8BR.3 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.125, H2O.1, H2O.1, H2O.5

1 x 8BR: 8-BROMO-ADENOSINE-5'-MONOPHOSPHATE(Non-covalent)

8BR.3: 14 residues within 4Å: Chain A: Y.83, H.84, M.197, D.242, L.243, N.245, Y.253, T.257, F.264, M.281, Q.293, F.296 Ligands: ZN.1, ZN.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Y.83, A:H.84, A:Q.293, A:Q.293 Salt bridges: A:H.84, A:H.88 pi-Stacking: A:F.296

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, R.X. et al., Crystal structures of the catalytic domain of phosphodiesterase 4B complexed with AMP, 8-Br-AMP, and rolipram. J.Mol.Biol. (2004)

Release Date

2004-12-07

Peptides

cAMP-specific 3',5'-cyclic phosphodiesterase 4B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

cAMP-specific 3',5'-cyclic phosphodiesterase 4B

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