SMTL ID : 1s22.1

Absolute Stereochemistry of Ulapualide A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-functional Binders)

CA.1: 1 residues within 4Å: Ligands: ATP.2 No protein-ligand interaction detected (PLIP)

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 20 residues within 4Å: Chain A: G.13, S.14, G.15, L.16, K.18, G.74, G.156, D.157, G.158, V.159, G.182, R.210, K.213, E.214, G.301, G.302, T.303, M.305, Y.306 Ligands: CA.1 26 PLIP interactions: 26 interactions with chain A Hydrogen bonds: A:S.14, A:S.14, A:G.15, A:L.16, A:G.156, A:D.157, A:D.157, A:D.157, A:G.158, A:V.159, A:V.159, A:K.213, A:E.214, A:E.214, A:G.302, A:T.303 Water bridges: A:K.18, A:K.18, A:D.157, A:G.182, A:E.214, A:E.214, A:K.336 Salt bridges: A:K.18, A:K.18 pi-Stacking: A:Y.306

1 x ULA: ULAPUALIDE A(Non-covalent)

ULA.3: 15 residues within 4Å: Chain A: G.23, D.24, D.25, Y.143, A.144, G.146, R.147, T.148, G.168, E.334, I.341, S.344, I.345, S.348, L.349 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.143, A:Y.143, A:Y.143, A:L.349

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 5 residues within 4Å: Chain A: A.310, D.311, Q.314, K.328, I.329 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.314, A:I.329 Water bridges: A:Q.314 EDO.5: 4 residues within 4Å: Chain A: V.30, F.31, P.32, D.56 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.56 Water bridges: A:V.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Allingham, J.S. et al., Absolute stereochemistry of ulapualide A. Org.Lett. (2004)

Release Date

2004-02-17

Peptides

Actin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Actin

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