SMTL ID : 1tsl.1

L. CASEI THYMIDYLATE SYNTHASE WITH SPECIES SPECIFIC INHIBITOR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain A: R.23, L.195, R.218, S.219 Chain B: R.178, R.179 Ligands: A15.2 7 PLIP interactions: 4 interactions with chain B, 3 interactions with chain A Water bridges: B:R.178, B:R.178 Salt bridges: B:R.178, B:R.179, A:R.23, A:R.218 Hydrogen bonds: A:S.219 PO4.3: 7 residues within 4Å: Chain A: R.178, R.179 Chain B: R.23, L.195, R.218, S.219 Ligands: A15.4 7 PLIP interactions: 3 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:S.219 Salt bridges: B:R.23, B:R.218, A:R.178, A:R.179 Water bridges: A:R.178, A:R.178

2 x A15: 3'-3"-DICHLOROPHENOL-1,8-3H-BENZO[DE]ISOCHROMEN-1-ONE(Non-covalent)

A15.2: 10 residues within 4Å: Chain A: T.24, E.84, W.85, E.88, G.105, H.106, A.194, V.316 Chain B: R.179 Ligands: PO4.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:T.24, A:W.85, A:V.316 Hydrogen bonds: A:W.85, A:H.106 A15.4: 10 residues within 4Å: Chain A: R.179 Chain B: T.24, E.84, W.85, E.88, G.105, H.106, A.194, V.316 Ligands: PO4.3 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:T.24, B:W.85, B:V.316 Hydrogen bonds: B:E.84, B:W.85, B:H.106, B:V.316, B:V.316

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stout, T.J. et al., Structure-based design of inhibitors specific for bacterial thymidylate synthase. Biochemistry (1999)

Release Date

1998-06-17

Peptides

THYMIDYLATE SYNTHASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

THYMIDYLATE SYNTHASE

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