SMTL ID : 1tx2.3 (3 other biounits)

Dihydropteroate Synthetase, With Bound Inhibitor MANIC, From Bacillus anthracis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

homo-tetramer

Ligands

20 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: I.45, R.274, H.276 Ligands: 680.6 Ligand excluded by PLIP SO4.2: 3 residues within 4Å: Chain A: K.70, R.73, E.113 Ligand excluded by PLIP SO4.3: 1 residues within 4Å: Chain A: R.239 Ligand excluded by PLIP SO4.4: 2 residues within 4Å: Chain A: S.241, R.254 Ligand excluded by PLIP SO4.5: 3 residues within 4Å: Chain A: E.218, R.221, N.222 Ligand excluded by PLIP SO4.7: 4 residues within 4Å: Chain B: I.45, R.274, H.276 Ligands: 680.12 Ligand excluded by PLIP SO4.8: 3 residues within 4Å: Chain B: K.70, R.73, E.113 Ligand excluded by PLIP SO4.9: 1 residues within 4Å: Chain B: R.239 Ligand excluded by PLIP SO4.10: 2 residues within 4Å: Chain B: S.241, R.254 Ligand excluded by PLIP SO4.11: 3 residues within 4Å: Chain B: E.218, R.221, N.222 Ligand excluded by PLIP SO4.13: 4 residues within 4Å: Chain C: I.45, R.274, H.276 Ligands: 680.18 Ligand excluded by PLIP SO4.14: 3 residues within 4Å: Chain C: K.70, R.73, E.113 Ligand excluded by PLIP SO4.15: 2 residues within 4Å: Chain C: N.47, R.239 Ligand excluded by PLIP SO4.16: 2 residues within 4Å: Chain C: S.241, R.254 Ligand excluded by PLIP SO4.17: 2 residues within 4Å: Chain C: R.221, N.222 Ligand excluded by PLIP SO4.19: 4 residues within 4Å: Chain D: I.45, R.274, H.276 Ligands: 680.24 Ligand excluded by PLIP SO4.20: 3 residues within 4Å: Chain D: K.70, R.73, E.113 Ligand excluded by PLIP SO4.21: 2 residues within 4Å: Chain D: N.47, R.239 Ligand excluded by PLIP SO4.22: 2 residues within 4Å: Chain D: S.241, R.254 Ligand excluded by PLIP SO4.23: 2 residues within 4Å: Chain D: R.221, N.222 Ligand excluded by PLIP

4 x 680: 6-METHYLAMINO-5-NITROISOCYTOSINE(Non-covalent)

680.6: 13 residues within 4Å: Chain A: D.81, D.121, N.140, I.142, I.163, M.165, D.204, F.209, L.234, G.236, K.240, R.274 Ligands: SO4.1 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:N.140, A:N.140, A:K.240 Water bridges: A:D.121, A:D.121, A:G.236, A:G.236, A:R.274 Salt bridges: A:D.204 680.12: 13 residues within 4Å: Chain B: D.81, D.121, N.140, I.142, I.163, M.165, D.204, F.209, L.234, G.236, K.240, R.274 Ligands: SO4.7 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:N.140, B:N.140, B:K.240 Water bridges: B:D.121, B:D.121, B:G.236, B:G.236, B:R.274 Salt bridges: B:D.204 680.18: 12 residues within 4Å: Chain C: D.121, N.140, I.142, I.163, M.165, D.204, F.209, L.234, G.236, K.240, R.274 Ligands: SO4.13 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:N.140, C:N.140, C:K.240 Water bridges: C:D.121, C:I.207, C:R.274 Salt bridges: C:D.204 680.24: 12 residues within 4Å: Chain D: D.121, N.140, I.142, I.163, M.165, D.204, F.209, L.234, G.236, K.240, R.274 Ligands: SO4.19 7 PLIP interactions: 7 interactions with chain D Hydrogen bonds: D:N.140, D:N.140, D:K.240 Water bridges: D:D.121, D:I.207, D:R.274 Salt bridges: D:D.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Babaoglu, K. et al., Crystal Structure of 7,8-Dihydropteroate Synthase from Bacillus anthracis; Mechanism and Novel Inhibitor Design. STRUCTURE (2004)

Release Date

2004-09-14

Peptides

DHPS, Dihydropteroate synthase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
B

D
B

DHPS, Dihydropteroate synthase

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