SMTL ID : 1xap.1

Structure of the ligand binding domain of the Retinoic Acid Receptor beta

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x TTB: 4-[(1E)-2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRONAPHTHALEN-2-YL)PROP-1-ENYL]BENZOIC ACID(Non-covalent)

TTB.1: 16 residues within 4Å: Chain A: F.74, L.77, A.78, C.81, L.112, L.115, I.116, I.119, R.122, F.132, S.133, F.148, R.240, V.241, L.244, L.260 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.74, A:A.78, A:L.112, A:L.115, A:L.115, A:I.119, A:F.132, A:F.148, A:R.240, A:L.244, A:L.260 Hydrogen bonds: A:S.133 Salt bridges: A:R.122 pi-Stacking: A:F.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Germain, P. et al., Rational design of RAR-selective ligands revealed by RARbeta crystal structure. Embo Rep. (2004)

Release Date

2004-11-16

Peptides

Retinoic acid receptor beta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Retinoic acid receptor beta

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