SMTL ID : 4dm6.2 (1 other biounit)

Crystal structure of RARb LBD homodimer in complex with TTNPB

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x TTB: 4-[(1E)-2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRONAPHTHALEN-2-YL)PROP-1-ENYL]BENZOIC ACID(Non-covalent)

TTB.1: 19 residues within 4Å: Chain A: F.45, W.71, F.74, L.77, A.78, C.81, L.115, I.116, I.119, R.122, F.132, S.133, G.147, F.148, G.237, R.240, V.241, L.244, I.256 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:W.71, A:F.74, A:F.74, A:F.74, A:L.77, A:A.78, A:L.115, A:L.115, A:L.115, A:I.116, A:I.119, A:I.119, A:F.132, A:F.132, A:F.148, A:R.240, A:V.241, A:I.256, A:I.256 Hydrogen bonds: A:S.133 Salt bridges: A:R.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Osz, J. et al., Structural basis for a molecular allosteric control mechanism of cofactor binding to nuclear receptors. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2012-03-07

Peptides

Retinoic acid receptor beta: A
Nuclear receptor coactivator 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
F

Retinoic acid receptor beta

Nuclear receptor coactivator 1

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