SMTL ID : 1ybk.1

RHCC cocrystallized with CAPB

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

homo-tetramer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: S.25, N.28 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.28 Water bridges: A:S.25, A:S.25 SO4.2: 1 residues within 4Å: Chain B: R.36 3 PLIP interactions: 3 interactions with chain B Water bridges: B:R.36, B:R.36 Salt bridges: B:R.36 SO4.4: 2 residues within 4Å: Chain D: S.25, N.28 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:N.28 Water bridges: D:D.21, D:S.25, D:L.29

1 x BEQ: N-(CARBOXYMETHYL)-N,N-DIMETHYL-3-[(1-OXODODECYL)AMINO]-1-PROPANAMINIUM INNER SALT(Non-covalent)

BEQ.3: 6 residues within 4Å: Chain C: S.25, N.28, L.29, L.32, R.33 Chain D: T.31 6 PLIP interactions: 5 interactions with chain C, 1 interactions with chain D Hydrophobic interactions: C:L.29 Hydrogen bonds: C:N.28 Water bridges: C:S.25, C:R.33, D:Y.23 Salt bridges: C:R.33

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ozbek, S. et al., Favourable mediation of crystal contacts by cocoamidopropylbetaine (CAPB). Acta Crystallogr.,Sect.D (2005)

Release Date

2005-01-18

Peptides

tetrabrachion: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

tetrabrachion

Related Entries With Identical Sequence