SMTL ID : 1yuy.1

HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE GENOTYPE 2a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.505, V.530, K.531, T.532 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.531, A:T.532, A:T.532 Salt bridges: A:R.505, A:K.531 SO4.2: 4 residues within 4Å: Chain A: R.48, T.221, R.222, C.223 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:C.223 Water bridges: A:R.158, A:F.224 Salt bridges: A:R.48 SO4.3: 6 residues within 4Å: Chain A: W.6, A.9, L.10, S.46, A.49, K.50 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.46 Water bridges: A:G.8, A:G.8, A:I.11 Salt bridges: A:K.50 SO4.4: 4 residues within 4Å: Chain A: F.145, K.155, R.386, T.390 8 PLIP interactions: 8 interactions with chain A Water bridges: A:K.155, A:S.367, A:R.386, A:R.386, A:R.386, A:T.390 Salt bridges: A:K.155, A:R.386

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Biswal, B.K. et al., Crystal structures of the RNA dependent RNA polymerase genotype 2a of hepatitis C virus reveal two conformations and suggest mechanisms of inhibition by non-nucleoside inhibitors. J.Biol.Chem. (2005)

Release Date

2005-03-22

Peptides

RNA-Dependent RNA polymerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA-Dependent RNA polymerase

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