SMTL ID : 1z3i.3 (2 other biounits)

Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.579, C.584, C.587, H.611 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.579, A:C.584, A:C.587, A:H.611 ZN.11: 4 residues within 4Å: Chain B: H.579, C.584, C.587, H.611 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.579, B:C.584, B:C.587, B:H.611

18 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: Q.60, G.91, R.512, D.513 Ligand excluded by PLIP SO4.3: 10 residues within 4Å: Chain A: G.89, L.90, G.91, K.92, T.93, C.481, G.482, Q.505, R.509, R.512 Ligand excluded by PLIP SO4.4: 4 residues within 4Å: Chain A: A.20, L.21, R.61, K.65 Ligand excluded by PLIP SO4.5: 3 residues within 4Å: Chain A: R.297, T.299 Chain B: R.585 Ligand excluded by PLIP SO4.6: 6 residues within 4Å: Chain A: P.122, S.123, S.177, Y.178, E.179, R.203 Ligand excluded by PLIP SO4.7: 2 residues within 4Å: Chain A: R.57, Y.306 Ligand excluded by PLIP SO4.8: 4 residues within 4Å: Chain A: T.603, C.604, D.605, N.608 Ligand excluded by PLIP SO4.9: 3 residues within 4Å: Chain A: Y.24, P.27, R.74 Ligand excluded by PLIP SO4.10: 3 residues within 4Å: Chain A: G.194, Q.221, R.222 Ligand excluded by PLIP SO4.12: 4 residues within 4Å: Chain B: Q.60, G.91, R.512, D.513 Ligand excluded by PLIP SO4.13: 10 residues within 4Å: Chain B: G.89, L.90, G.91, K.92, T.93, C.481, G.482, Q.505, R.509, R.512 Ligand excluded by PLIP SO4.14: 4 residues within 4Å: Chain B: A.20, L.21, R.61, K.65 Ligand excluded by PLIP SO4.15: 3 residues within 4Å: Chain A: R.585 Chain B: R.297, T.299 Ligand excluded by PLIP SO4.16: 6 residues within 4Å: Chain B: P.122, S.123, S.177, Y.178, E.179, R.203 Ligand excluded by PLIP SO4.17: 2 residues within 4Å: Chain B: R.57, Y.306 Ligand excluded by PLIP SO4.18: 4 residues within 4Å: Chain B: T.603, C.604, D.605, N.608 Ligand excluded by PLIP SO4.19: 3 residues within 4Å: Chain B: Y.24, P.27, R.74 Ligand excluded by PLIP SO4.20: 3 residues within 4Å: Chain B: G.194, Q.221, R.222 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thoma, N.H. et al., Structure of the SWI2/SNF2 chromatin-remodeling domain of eukaryotic Rad54. Nat.Struct.Mol.Biol. (2005)

Release Date

2005-04-05

Peptides

similar to RAD54-like: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

B
X

similar to RAD54-like

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