- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x PO4: PHOSPHATE ION(Non-functional Binders)
- 2 x PH9: (2Z)-2-[(1-ADAMANTYLCARBONYL)AMINO]-3-[4-(2-BROMOPHENOXY)PHENYL]PROP-2-ENOIC ACID(Non-covalent)
PH9.3: 18 residues within 4Å:- Chain A: F.194, Y.196, P.198, R.201, N.317, C.367, S.369, L.385, G.411, N.412, M.415, Y.416, Q.447, I.448, Y.449, G.450, S.557
- Ligands: GOL.4
12 PLIP interactions:12 interactions with chain A- Hydrophobic interactions: A:F.194, A:P.198, A:L.385, A:Y.416, A:Y.449, A:Y.449
- Hydrogen bonds: A:Y.449, A:S.557
- Water bridges: A:G.450, A:G.450
- Halogen bonds: A:Y.196, A:Y.449
PH9.9: 18 residues within 4Å:- Chain B: F.194, Y.196, P.198, R.201, N.317, C.367, S.369, L.385, G.411, N.412, M.415, Y.416, Q.447, I.448, Y.449, G.450, S.557
- Ligands: GOL.10
12 PLIP interactions:12 interactions with chain B- Hydrophobic interactions: B:F.194, B:P.198, B:L.385, B:Y.416, B:Y.449, B:Y.449
- Hydrogen bonds: B:Y.449, B:S.557
- Water bridges: B:G.450, B:G.450
- Halogen bonds: B:Y.196, B:Y.449
- 6 x GOL: GLYCEROL(Non-functional Binders)
GOL.4: 4 residues within 4Å:- Chain A: D.320, C.367, S.368
- Ligands: PH9.3
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.320, A:S.368
- Water bridges: A:R.387
GOL.5: 5 residues within 4Å:- Chain A: C.214, T.330, Y.359
- Chain B: R.502
- Ligands: GOL.12
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain B- Water bridges: A:S.327, B:R.532
- Hydrogen bonds: B:R.502
GOL.6: 5 residues within 4Å:- Chain A: L.420, I.483, L.498
- Chain B: D.360
- Ligands: GOL.11
2 PLIP interactions:2 interactions with chain B- Water bridges: B:D.360, B:D.360
GOL.10: 4 residues within 4Å:- Chain B: D.320, C.367, S.368
- Ligands: PH9.9
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:D.320, B:S.368
- Water bridges: B:R.387
GOL.11: 5 residues within 4Å:- Chain A: R.502
- Chain B: C.214, T.330, Y.359
- Ligands: GOL.6
3 PLIP interactions:1 interactions with chain B, 2 interactions with chain A- Water bridges: B:S.327, A:R.532
- Hydrogen bonds: A:R.502
GOL.12: 5 residues within 4Å:- Chain A: D.360
- Chain B: L.420, I.483, L.498
- Ligands: GOL.5
1 PLIP interactions:1 interactions with chain A- Water bridges: A:D.360
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pfefferkorn, J.A. et al., Inhibitors of HCV NS5B polymerase. Part 2: Evaluation of the northern region of (2Z)-2-benzoylamino-3-(4-phenoxy-phenyl)-acrylic acid. Bioorg.Med.Chem.Lett. (2005)
- Release Date
- 2005-06-07
- Peptides
- HCV NS5B POLYMERASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x PO4: PHOSPHATE ION(Non-functional Binders)
- 2 x PH9: (2Z)-2-[(1-ADAMANTYLCARBONYL)AMINO]-3-[4-(2-BROMOPHENOXY)PHENYL]PROP-2-ENOIC ACID(Non-covalent)
- 6 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pfefferkorn, J.A. et al., Inhibitors of HCV NS5B polymerase. Part 2: Evaluation of the northern region of (2Z)-2-benzoylamino-3-(4-phenoxy-phenyl)-acrylic acid. Bioorg.Med.Chem.Lett. (2005)
- Release Date
- 2005-06-07
- Peptides
- HCV NS5B POLYMERASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A