SMTL ID : 2a88.1

Crystal structure of A Pantothenate synthetase, apo enzyme in C2 space group

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: H.44, H.47, K.160, S.196, S.197 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.197, A:S.197 Water bridges: A:S.197, A:S.197 Salt bridges: A:H.44, A:H.47, A:K.160 SO4.4: 5 residues within 4Å: Chain B: H.44, H.47, K.160, S.196, S.197 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:S.197, B:S.197 Water bridges: B:S.197, B:S.197 Salt bridges: B:H.44, B:H.47, B:K.160

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: L.147, Q.148, R.151, P.152, L.177, D.178, V.179 Chain B: Q.148 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Q.148, A:P.152, B:Q.148 Water bridges: A:D.178 GOL.3: 10 residues within 4Å: Chain A: M.109, Y.110, P.111, D.112, G.113, L.114, R.115, T.116, K.145 Chain B: D.174 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.110, A:D.112, A:R.115, A:K.145 Water bridges: A:R.115 GOL.5: 8 residues within 4Å: Chain A: Q.148 Chain B: L.147, Q.148, R.151, P.152, L.177, D.178, V.179 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:Q.148, B:P.152, A:Q.148 Water bridges: B:D.178 GOL.6: 10 residues within 4Å: Chain A: D.174 Chain B: M.109, Y.110, P.111, D.112, G.113, L.114, R.115, T.116, K.145 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Y.110, B:D.112, B:R.115, B:K.145 Water bridges: B:R.115

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, S. et al., Crystal Structure of the Pantothenate Synthetase from Mycobacterium tuberculosis, Snapshots of the Enzyme in Action. Biochemistry (2006)

Release Date

2006-02-21

Peptides

Pantoate--beta-alanine ligase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Pantoate--beta-alanine ligase

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