SMTL ID : 2b4y.1 (3 other biounits)

Crystal Structure of Human Sirtuin homolog 5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.135, C.138, C.176, C.181 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.135, A:C.138, A:C.176, A:C.181

1 x APR: ADENOSINE-5-DIPHOSPHORIBOSE(Non-covalent)

APR.2: 18 residues within 4Å: Chain A: G.27, A.28, G.29, A.32, E.33, Q.109, H.127, G.218, T.219, S.220, V.223, N.244, T.245, E.246, G.260, P.261, C.262 Ligands: EPE.3 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:A.28, A:G.29, A:E.33, A:Q.109, A:H.127, A:S.220, A:S.220, A:N.244, A:T.245, A:T.245, A:T.245, A:C.262 Water bridges: A:E.33, A:E.246, A:T.247

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.3: 12 residues within 4Å: Chain A: A.51, A.55, Y.71, R.74, I.111, H.127, V.190, W.191, F.192, G.193, E.194 Ligands: APR.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.193, A:E.194 Salt bridges: A:R.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Antoshenko, T. et al., Crystal Structure of Human Sirtuin homolog 5 in complex with NAD. To be Published

Release Date

2006-02-28

Peptides

NAD-dependent deacetylase sirtuin-5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NAD-dependent deacetylase sirtuin-5

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