SMTL ID : 2b81.1 (3 other biounits)

Crystal Structure of the Luciferase-like Monooxygenase from Bacillus cereus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

18 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: S.149, H.150, E.151 Ligand excluded by PLIP SO4.2: 1 residues within 4Å: Chain A: K.277 Ligand excluded by PLIP SO4.3: 4 residues within 4Å: Chain A: N.12, H.13, F.14, N.17 Ligand excluded by PLIP SO4.4: 5 residues within 4Å: Chain A: G.201, F.202, S.203, Q.204, Y.220 Ligand excluded by PLIP SO4.5: 4 residues within 4Å: Chain A: T.152, G.154, E.155, R.158 Ligand excluded by PLIP SO4.6: 5 residues within 4Å: Chain A: Q.124 Chain B: T.42, M.43, Y.82 Ligands: MES.23 Ligand excluded by PLIP SO4.7: 4 residues within 4Å: Chain A: R.276, K.277, I.280, E.315 Ligand excluded by PLIP SO4.8: 5 residues within 4Å: Chain A: P.221, R.222, S.223, H.226 Ligands: GOL.16 Ligand excluded by PLIP SO4.9: 4 residues within 4Å: Chain A: S.223, P.224, V.225, I.285 Ligand excluded by PLIP SO4.10: 2 residues within 4Å: Chain A: Y.219, R.222 Ligand excluded by PLIP SO4.11: 2 residues within 4Å: Chain A: F.38, H.39 Ligand excluded by PLIP SO4.12: 3 residues within 4Å: Chain A: H.150, E.151, R.153 Ligand excluded by PLIP SO4.17: 7 residues within 4Å: Chain B: D.138, T.200, G.201, F.202, S.203, Q.204, Y.220 Ligand excluded by PLIP SO4.18: 3 residues within 4Å: Chain B: R.222, S.223, H.226 Ligand excluded by PLIP SO4.19: 2 residues within 4Å: Chain B: P.261, R.276 Ligand excluded by PLIP SO4.20: 3 residues within 4Å: Chain B: S.149, H.150, E.151 Ligand excluded by PLIP SO4.21: 4 residues within 4Å: Chain B: T.152, G.154, E.155, R.158 Ligand excluded by PLIP SO4.22: 3 residues within 4Å: Chain B: Y.219, R.222, H.226 Ligand excluded by PLIP

3 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.13: 8 residues within 4Å: Chain A: T.42, M.43, K.45, Q.46, V.47, Y.82, Y.87, Y.90 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Q.46, A:V.47, A:Y.82, A:Y.87 Water bridges: A:K.45, A:E.48 MES.14: 5 residues within 4Å: Chain A: F.38, P.71, G.74, D.75, P.76 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.38 MES.23: 9 residues within 4Å: Chain B: T.42, M.43, K.45, Q.46, V.47, Y.82, Y.87, Y.90 Ligands: SO4.6 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:K.45, B:Q.46, B:V.47, B:Y.82, B:Y.87, B:Y.90 Water bridges: B:E.48

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.15: 3 residues within 4Å: Chain A: R.158, W.209, H.213 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.209 Water bridges: A:R.158, A:H.213 GOL.16: 8 residues within 4Å: Chain A: P.221, R.222, S.223, L.270, G.271, Y.272, Y.286 Ligands: SO4.8 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:P.221, A:L.270 Water bridges: A:L.270, A:L.270 GOL.24: 1 residues within 4Å: Chain B: S.174 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:S.174, B:S.174, B:S.174 Water bridges: B:S.174, B:S.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y. et al., Crystal Structure of the Luciferase-like Monooxygenase from Bacillus cereus. To be Published

Release Date

2005-11-22

Peptides

Luciferase-like monooxygenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Luciferase-like monooxygenase

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