SMTL ID : 2bpa.3 (3 other biounits)

ATOMIC STRUCTURE OF SINGLE-STRANDED DNA BACTERIOPHAGE PHIX174 AND ITS FUNCTIONAL IMPLICATIONS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-6-6-6-mer

Ligands

6 x DA- DA- DA- DA- DC: DNA (5'-D(*AP*AP*AP*AP*C)-3')(Non-covalent)

DA-DA-DA-DA-DC.1: 17 residues within 4Å: Chain A: E.207, F.211, D.217, S.221 Chain C: G.26, A.27, R.28, Y.31 Chain D: M.10, T.418, R.420, D.421 Chain G: Q.4, T.5, G.6, A.7, E.8 Protein-ligand interaction information (PLIP) not available DA-DA-DA-DA-DC.2: 13 residues within 4Å: Chain D: E.207, F.211, D.217, S.221 Chain F: G.26, A.27, R.28, Y.31 Chain M: Q.4, T.5, G.6, A.7, E.8 Protein-ligand interaction information (PLIP) not available DA-DA-DA-DA-DC.3: 13 residues within 4Å: Chain A: Q.4, T.5, G.6, A.7, E.8 Chain G: E.207, F.211, D.217, S.221 Chain I: G.26, A.27, R.28, Y.31 Protein-ligand interaction information (PLIP) not available DA-DA-DA-DA-DC.4: 17 residues within 4Å: Chain G: M.10, T.418, R.420, D.421 Chain J: E.207, F.211, D.217, S.221 Chain L: G.26, A.27, R.28, Y.31 Chain P: Q.4, T.5, G.6, A.7, E.8 Protein-ligand interaction information (PLIP) not available DA-DA-DA-DA-DC.5: 17 residues within 4Å: Chain D: Q.4, T.5, G.6, A.7, E.8 Chain M: E.207, F.211, D.217, S.221 Chain O: G.26, A.27, R.28, Y.31 Chain P: M.10, T.418, R.420, D.421 Protein-ligand interaction information (PLIP) not available DA-DA-DA-DA-DC.6: 13 residues within 4Å: Chain J: Q.4, T.5, G.6, A.7, E.8 Chain P: E.207, F.211, D.217, S.221 Chain R: G.26, A.27, R.28, Y.31 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McKenna, R. et al., Atomic structure of single-stranded DNA bacteriophage phi X174 and its functional implications. Nature (1992)

Release Date

1991-12-03

Peptides

PROTEIN (SUBUNIT OF BACTERIOPHAGE PHIX174): ADGJMP
PROTEIN (SUBUNIT OF BACTERIOPHAGE PHIX174): BEHKNQ
PROTEIN (SUBUNIT OF BACTERIOPHAGE PHIX174): CFILOR

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

D
1

G
1

J
1

M
1

P
1

B
2

E
2

H
2

K
2

N
2

Q
2

C
3

F
3

I
3

L
3

O
3

R
3

PROTEIN (SUBUNIT OF BACTERIOPHAGE PHIX174)

PROTEIN (SUBUNIT OF BACTERIOPHAGE PHIX174)

PROTEIN (SUBUNIT OF BACTERIOPHAGE PHIX174)

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