SMTL ID : 2bu5.1

crystal structures of human pyruvate dehydrogenase kinase 2 containing physiological and synthetic ligands

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

homo-dimer

Ligands

2 x TF1: 4-({(2R,5S)-2,5-DIMETHYL-4-[(2R)-3,3,3-TRIFLUORO-2-HYDROXY-2-METHYLPROPANOYL]PIPERAZIN-1-YL}CARBONYL)BENZONITRILE(Non-covalent)

TF1.1: 10 residues within 4Å: Chain A: L.18, Q.22, F.23, F.26, T.35, S.36, F.39, L.40, L.155, Q.158 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.18, A:L.18, A:Q.22, A:F.26, A:F.39, A:F.39, A:F.39, A:Q.158 Hydrogen bonds: A:Q.22 TF1.2: 10 residues within 4Å: Chain B: L.18, Q.22, F.23, F.26, T.35, S.36, F.39, L.40, L.155, Q.158 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:L.18, B:L.18, B:Q.22, B:F.26, B:F.39, B:F.39, B:F.39, B:Q.158 Hydrogen bonds: B:Q.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Knoechel, T.R. et al., Regulatory Roles of the N-Terminal Domain Based on Crystal Structures of Human Pyruvate Dehydrogenase Kinase 2 Containing Physiological and Synthetic Ligands. Biochemistry (2006)

Release Date

2006-02-02

Peptides

PYRUVATE DEHYDROGENASE KINASE ISOENZYME 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PYRUVATE DEHYDROGENASE KINASE ISOENZYME 2

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