- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- hetero-12-12-mer
- Ligands
- 12 x FE: FE (III) ION(Non-covalent)
- 12 x 4NC: 4-NITROCATECHOL(Non-covalent)
4NC.2: 9 residues within 4Å:- Chain A: P.19, Y.20
- Chain B: Y.109, Y.148, W.150, S.158, H.161, H.163
- Ligands: FE.1
8 PLIP interactions:3 interactions with chain A, 5 interactions with chain B- Hydrophobic interactions: A:P.19, A:Y.20, B:Y.148, B:Y.148, B:W.150
- Water bridges: A:Y.20, B:S.158
- pi-Stacking: B:W.150
4NC.4: 9 residues within 4Å:- Chain C: P.19, Y.20
- Chain D: Y.109, Y.148, W.150, S.158, H.161, H.163
- Ligands: FE.3
8 PLIP interactions:5 interactions with chain D, 3 interactions with chain C- Hydrophobic interactions: D:Y.148, D:Y.148, D:W.150, C:P.19, C:Y.20
- Water bridges: D:S.158, C:Y.20
- pi-Stacking: D:W.150
4NC.6: 9 residues within 4Å:- Chain E: P.19, Y.20
- Chain F: Y.109, Y.148, W.150, S.158, H.161, H.163
- Ligands: FE.5
8 PLIP interactions:3 interactions with chain E, 5 interactions with chain F- Hydrophobic interactions: E:P.19, E:Y.20, F:Y.148, F:Y.148, F:W.150
- Water bridges: E:Y.20, F:S.158
- pi-Stacking: F:W.150
4NC.8: 9 residues within 4Å:- Chain G: P.19, Y.20
- Chain H: Y.109, Y.148, W.150, S.158, H.161, H.163
- Ligands: FE.7
8 PLIP interactions:5 interactions with chain H, 3 interactions with chain G- Hydrophobic interactions: H:Y.148, H:Y.148, H:W.150, G:P.19, G:Y.20
- Water bridges: H:S.158, G:Y.20
- pi-Stacking: H:W.150
4NC.10: 9 residues within 4Å:- Chain I: P.19, Y.20
- Chain J: Y.109, Y.148, W.150, S.158, H.161, H.163
- Ligands: FE.9
8 PLIP interactions:3 interactions with chain I, 5 interactions with chain J- Hydrophobic interactions: I:P.19, I:Y.20, J:Y.148, J:Y.148, J:W.150
- Water bridges: I:Y.20, J:S.158
- pi-Stacking: J:W.150
4NC.12: 9 residues within 4Å:- Chain K: P.19, Y.20
- Chain L: Y.109, Y.148, W.150, S.158, H.161, H.163
- Ligands: FE.11
8 PLIP interactions:5 interactions with chain L, 3 interactions with chain K- Hydrophobic interactions: L:Y.148, L:Y.148, L:W.150, K:P.19, K:Y.20
- Water bridges: L:S.158, K:Y.20
- pi-Stacking: L:W.150
4NC.14: 9 residues within 4Å:- Chain M: P.19, Y.20
- Chain N: Y.109, Y.148, W.150, S.158, H.161, H.163
- Ligands: FE.13
8 PLIP interactions:5 interactions with chain N, 3 interactions with chain M- Hydrophobic interactions: N:Y.148, N:Y.148, N:W.150, M:P.19, M:Y.20
- Water bridges: N:S.158, M:Y.20
- pi-Stacking: N:W.150
4NC.16: 9 residues within 4Å:- Chain O: P.19, Y.20
- Chain P: Y.109, Y.148, W.150, S.158, H.161, H.163
- Ligands: FE.15
10 PLIP interactions:3 interactions with chain O, 7 interactions with chain P- Hydrophobic interactions: O:P.19, O:Y.20, P:Y.148, P:Y.148, P:W.150
- Water bridges: O:Y.20, P:S.158
- Hydrogen bonds: P:H.163, P:H.163
- pi-Stacking: P:W.150
4NC.18: 9 residues within 4Å:- Chain Q: P.19, Y.20
- Chain R: Y.109, Y.148, W.150, S.158, H.161, H.163
- Ligands: FE.17
8 PLIP interactions:5 interactions with chain R, 3 interactions with chain Q- Hydrophobic interactions: R:Y.148, R:Y.148, R:W.150, Q:P.19, Q:Y.20
- Water bridges: R:S.158, Q:Y.20
- pi-Stacking: R:W.150
4NC.20: 9 residues within 4Å:- Chain S: P.19, Y.20
- Chain T: Y.109, Y.148, W.150, S.158, H.161, H.163
- Ligands: FE.19
8 PLIP interactions:5 interactions with chain T, 3 interactions with chain S- Hydrophobic interactions: T:Y.148, T:Y.148, T:W.150, S:P.19, S:Y.20
- Water bridges: T:S.158, S:Y.20
- pi-Stacking: T:W.150
4NC.22: 9 residues within 4Å:- Chain U: P.19, Y.20
- Chain V: Y.109, Y.148, W.150, S.158, H.161, H.163
- Ligands: FE.21
8 PLIP interactions:3 interactions with chain U, 5 interactions with chain V- Hydrophobic interactions: U:P.19, U:Y.20, V:Y.148, V:Y.148, V:W.150
- Water bridges: U:Y.20, V:S.158
- pi-Stacking: V:W.150
4NC.24: 9 residues within 4Å:- Chain W: P.19, Y.20
- Chain X: Y.109, Y.148, W.150, S.158, H.161, H.163
- Ligands: FE.23
8 PLIP interactions:5 interactions with chain X, 3 interactions with chain W- Hydrophobic interactions: X:Y.148, X:Y.148, X:W.150, W:P.19, W:Y.20
- Water bridges: X:S.158, W:Y.20
- pi-Stacking: X:W.150
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vetting, M.W., Crystallographic Studies of Intradiol Dioxygenases. Phd Thesis (2001)
- Release Date
- 2006-10-26
- Peptides
- PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN: ACEGIKMOQSUW
PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN: BDFHJLNPRTVX - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AG
AI
AK
AM
AO
AQ
AS
AU
AW
AB
BD
BF
BH
BJ
BL
BN
BP
BR
BT
BV
BX
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- hetero-12-12-mer
- Ligands
- 12 x FE: FE (III) ION(Non-covalent)
- 12 x 4NC: 4-NITROCATECHOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vetting, M.W., Crystallographic Studies of Intradiol Dioxygenases. Phd Thesis (2001)
- Release Date
- 2006-10-26
- Peptides
- PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN: ACEGIKMOQSUW
PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN: BDFHJLNPRTVX - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AG
AI
AK
AM
AO
AQ
AS
AU
AW
AB
BD
BF
BH
BJ
BL
BN
BP
BR
BT
BV
BX
B