SMTL ID : 2eb9.1

Crystal Structure of Cu(II)(Sal-Leu)/apo-Myoglobin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

5 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain A: K.17, R.119, H.120, D.123 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.17, A:H.120 PO4.2: 2 residues within 4Å: Chain A: H.114, S.118 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.118, A:S.118 Salt bridges: A:H.114 PO4.3: 1 residues within 4Å: Chain A: H.117 3 PLIP interactions: 3 interactions with chain A Water bridges: A:H.117, A:Q.129 Salt bridges: A:H.117 PO4.4: 3 residues within 4Å: Chain A: H.13, K.17, D.123 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.123 Water bridges: A:H.13, A:H.13 Salt bridges: A:H.13, A:K.17 PO4.5: 1 residues within 4Å: Chain A: K.63 2 PLIP interactions: 2 interactions with chain A Water bridges: A:Q.27 Salt bridges: A:K.63

1 x CUS: (N-SALICYLIDEN-L-LEUCINATO)-COPPER(II)(Non-covalent)

CUS.6: 11 residues within 4Å: Chain A: L.33, F.34, F.44, H.65, V.69, L.90, H.94, I.100, Y.104, L.105, F.139 11 PLIP interactions: 11 interactions with chain A, Hydrophobic interactions: A:L.33, A:F.34, A:F.44, A:V.69, A:I.100, A:Y.104, A:L.105, A:F.139 Salt bridges: A:H.65, A:H.94 Metal complexes: A:H.65

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.7: 8 residues within 4Å: Chain A: L.10, G.122, D.123, F.124, G.125, A.126, D.127, A.128 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.122, A:G.125, A:D.127, A:A.128 Water bridges: A:D.123, A:D.123

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abe, S. et al., Design and Structure Analysis of Artificial Metalloproteins: Selective Coordination of His64 to Copper Complexes with Square-Planar Structure in the apo-Myoglobin Scaffold. Inorg.Chem. (2007)

Release Date

2007-07-03

Peptides

Myoglobin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Myoglobin

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