SMTL ID : 2ei7.1

FACTOR XA IN COMPLEX WITH THE INHIBITOR trans-N1-[(5-Chloroindol-2-yl)carbonyl]-N2-[(5-methyl-4,5,6,7-tetrahydrothiazolo[5,4-c]pyridin-2-yl)carbonyl]-1,2-cyclohexanediamine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: D.56, N.58, Q.61, E.62, E.63, E.66 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.56, A:N.58, A:Q.61, A:E.66, H2O.1 CA.2: 5 residues within 4Å: Chain A: Y.173, D.174, A.210, R.211, K.214 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:Y.173, A:D.174, A:R.211, A:K.214, H2O.3

1 x D93: N-((1R,2R)-2-(5-CHLORO-1H-INDOLE-2-CARBOXAMIDO)CYCLOHEXYL)-5-METHYL-4,5,6,7-TETRAHYDROTHIAZOLO[5,4-C]PYRIDINE-2-CARBOXAMIDE(Non-covalent)

D93.3: 18 residues within 4Å: Chain A: E.83, T.84, Y.85, E.135, F.162, D.179, A.180, C.181, Q.182, V.203, W.205, G.206, E.207, G.208, C.209, G.216, I.217, Y.218 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.85, A:E.135, A:A.180, A:V.203 Hydrogen bonds: A:Q.182, A:G.208, A:G.208, A:G.208 Water bridges: A:S.185 pi-Cation interactions: A:W.205, A:W.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nagata, T. et al., Cycloalkanediamine derivatives as novel blood coagulation factor Xa inhibitors. To be Published

Release Date

2008-03-18

Peptides

Coagulation factor X, heavy chain: A
Coagulation factor X, light chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Coagulation factor X, heavy chain

Coagulation factor X, light chain

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