SMTL ID : 2ei8.1

FACTOR XA IN COMPLEX WITH THE INHIBITOR (1S,2R,4S)-N1-[(5-chloroindol-2-yl)carbonyl]-4-(N,N-dimethylcarbamoyl)-N2-[(5-methyl-4,5,6,7-tetrahydrothiazolo[5,4-c]pyridin-2-yl)carbonyl]-1,2-cyclohexanediamine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: Y.173, D.174, A.210, R.211, K.214 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:Y.173, A:D.174, A:R.211, A:K.214, H2O.1, H2O.2 CA.2: 4 residues within 4Å: Chain A: D.56, N.58, Q.61, E.66 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.56, A:N.58, A:Q.61, A:E.66, H2O.1, H2O.3

1 x DT8: N-((1R,2S,5S)-2-(5-CHLORO-1H-INDOLE-2-CARBOXAMIDO)-5-(DIMETHYLCARBAMOYL)CYCLOHEXYL)-5-METHYL-4,5,6,7-TETRAHYDROTHIAZOLO[5,4-C]PYRIDINE-2-CARBOXAMIDE(Non-covalent)

DT8.3: 18 residues within 4Å: Chain A: E.83, T.84, Y.85, F.162, D.179, A.180, C.181, Q.182, S.185, V.203, W.205, G.206, E.207, G.208, C.209, G.216, I.217, Y.218 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.85, A:A.180, A:V.203, A:W.205 Hydrogen bonds: A:Q.182, A:G.206, A:G.208, A:G.208 Water bridges: A:Q.182, A:G.206 pi-Cation interactions: A:W.205, A:W.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nagata, T. et al., Discovery of N-{(1R,2S,5S)-2-{[(5-Chloroindol-2-yl)carbonyl]amino}-5-[(dimethylamino)carbonyl]cyclohexyl}-5-methyl-4,5,6,7-tetrahydrothiazolo[5,4-c]pyridine-2-carboxamide hydrochloride: A Novel, Potent and Orally Active Direct Inhibitor of Factor Xa. To be Published

Release Date

2008-03-18

Peptides

Coagulation factor X, heavy chain: A
Coagulation factor X, light chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Coagulation factor X, heavy chain

Coagulation factor X, light chain

Related Entries With Identical Sequence